PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775173.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 508aa MW: 56892.6 Da PI: 6.5716

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.5e-17	155	204	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022775173.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 204 78*****************......55**********************997 PP
2	AP2	44.4	4.1e-14	247	297	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k++g XP_022775173.1 247 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDRAAIKFNG 297 89******.7**5553..2.26******99*********9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MWDLNDSPDQ PRDDESEGCS SQKTSIDGDE EKGKRVGSVS NSSSSALVIE DGSEEEDGER 60 VKAALKKRSS KIFGFSVSHE EESMESDPGP VTRQFFPLDQ DPEMGATSGG GGAGFPRAHW 120 VGVKFCQSEP LATGKSVEVS QPTKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV 180 YLGGFDTAHA AARAYDRAAI KFRGVEADIN FSIEDYEEDL KQMSNLTKEE FVHVLRRQST 240 GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EIEAARAYDR AAIKFNGKDA 300 VTNFDPIIYD NELNSGGNAG DDNLDLSLGN STPKQNNVDF VAQKQIAMSD QHNLIPEADW 360 QYRGFRSKLN PLQEPCRSDD AHHRRSDGYS EAETMQLLSQ THIQSPALGK SDEMQRYGQL 420 RRPGENHMFH IFPPHVNPST YQIHFPSGSN GSRIESDLSL STSEYQQWQS GPHQFFANAA 480 ASSGFPSQIR PSQTWLQKNG FYSLMRPS

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MWDLNDSPDQ PRDDESEGCS SQKTSIDGDE EKGKRVGSVS NSSSSALVIE DGSEEEDGER  60
VKAALKKRSS KIFGFSVSHE EESMESDPGP VTRQFFPLDQ DPEMGATSGG GGAGFPRAHW  120
VGVKFCQSEP LATGKSVEVS QPTKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  180
YLGGFDTAHA AARAYDRAAI KFRGVEADIN FSIEDYEEDL KQMSNLTKEE FVHVLRRQST  240
GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EIEAARAYDR AAIKFNGKDA  300
VTNFDPIIYD NELNSGGNAG DDNLDLSLGN STPKQNNVDF VAQKQIAMSD QHNLIPEADW  360
QYRGFRSKLN PLQEPCRSDD AHHRRSDGYS EAETMQLLSQ THIQSPALGK SDEMQRYGQL  420
RRPGENHMFH IFPPHVNPST YQIHFPSGSN GSRIESDLSL STSEYQQWQS GPHQFFANAA  480
ASSGFPSQIR PSQTWLQKNG FYSLMRPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-126	AP2 family protein