PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775172.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 511aa    MW: 57209.9 Da    PI: 6.4641
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.5e-17155204155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_022775172.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 204
                     78*******************......55************************997 PP

2AP244.44.2e-14247297155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ +k  grW+A+   +     +k+++lg f+t+ eAa+a+++a+ k++g
  XP_022775172.1 247 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDRAAIKFNG 297
                     89********.7******5553..2.26**********99***********9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    
MWDLNDSPDQ PRDDESEGCS SQKTSIDGDE EKGKRVGSVS NSSSSALVIE DGSEEEDGER  60
VKAALKKRSS KIFGFSVSHE EESMESDPGP VTRQFFPLDQ DPEMGATSGG GGAGFPRAHW  120
VGVKFCQSEP LATGKSVEVS QPTKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  180
YLGGFDTAHA AARAYDRAAI KFRGVEADIN FSIEDYEEDL KQMSNLTKEE FVHVLRRQST  240
GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EIEAARAYDR AAIKFNGKDA  300
VTNFDPIIYD NELNSGETSG NAGDDNLDLS LGNSTPKQNN VDFVAQKQIA MSDQHNLIPE  360
ADWQYRGFRS KLNPLQEPCR SDDAHHRRSD GYSEAETMQL LSQTHIQSPA LGKSDEMQRY  420
GQLRRPGENH MFHIFPPHVN PSTYQIHFPS GSNGSRIESD LSLSTSEYQQ WQSGPHQFFA  480
NAAASSGFPS QIRPSQTWLQ KNGFYSLMRP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-128AP2 family protein