PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774978.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 395aa MW: 45110.5 Da PI: 7.447

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774978.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.7	2.5e-07	191	212	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_022774978.1 191 FCEICGKGFKRDANLRMHMRAH 212 6*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MVKMSSEICT CQFRRTCSCR LFQSKIQYKD QSFFTFSVFK LINLHEPINK MSNPGELFSI 60 SPEYTISGGP SHLQQDPMGC ADPHVPLQNL STVKSRMDSL QYFLSQSVNA NTLISKDQMD 120 LVSSEIASAI QQIIVNGAAL LSCAQITNYP NPTPIPNQTP DPKPELDDYD EGVSEIIELD 180 AVELLSEHLH FCEICGKGFK RDANLRMHMR AHGNQYKTPE ALAKKSENKW EVKNSGRNIR 240 FSCPYDGCNR NKKHHKFRPL KSVICVRNHF KRSHCPKMFR CNRCHKKSFS VLTDLKGHLK 300 HCGGVEESKK WKCSCGNSFS RKDKLFGHLS LFEGHMPAVT EEKEDRKLKG VVAMEEDEEK 360 EEELMESKRC LEDEFFDGLL DGFGSFENYC LQDLL

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MVKMSSEICT CQFRRTCSCR LFQSKIQYKD QSFFTFSVFK LINLHEPINK MSNPGELFSI  60
SPEYTISGGP SHLQQDPMGC ADPHVPLQNL STVKSRMDSL QYFLSQSVNA NTLISKDQMD  120
LVSSEIASAI QQIIVNGAAL LSCAQITNYP NPTPIPNQTP DPKPELDDYD EGVSEIIELD  180
AVELLSEHLH FCEICGKGFK RDANLRMHMR AHGNQYKTPE ALAKKSENKW EVKNSGRNIR  240
FSCPYDGCNR NKKHHKFRPL KSVICVRNHF KRSHCPKMFR CNRCHKKSFS VLTDLKGHLK  300
HCGGVEESKK WKCSCGNSFS RKDKLFGHLS LFEGHMPAVT EEKEDRKLKG VVAMEEDEEK  360
EEELMESKRC LEDEFFDGLL DGFGSFENYC LQDLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.3	3e-70	C2H2 family protein