PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022774942.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ERF | ||||||||
Protein Properties | Length: 360aa MW: 40081.2 Da PI: 6.1839 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.5 | 5.2e-21 | 156 | 206 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ kl+ge XP_022774942.1 156 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 206 59******9.**********965...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence |
MYNSSSSSSV FSDPFKEELM KALEPFMKGA SSTSPLSSSS SYPSCSYSQL TASPSQPNLY 60 PEFCSPWSTH SFSNHGFSNY NNLMGFEQTG SIGLNQLTPS QILQIQAHIE QQQQQQQQQL 120 ASMATTSLQN QRLNFLSPKA VPMKHVSSAH PKPTKLYRGV RQRHWGKWVA EIRLPKNRTR 180 LWLGTFDTAE EAALAYDKAA YKLRGEFARL NFPHLKHQGA HVSGEFGDYK PLHSSVDAKL 240 QAICQSLQKQ GNSGKTCSVS DSKSNSVAPS QPKFEFDYPV KSEEFDQSSR FSDPKVENSL 300 SSSSSSDASD ESLAGSSSPE SDITFLDFSD SKWEDNENFG LEKYPSVEID WEAIRELSES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39780.1 | 2e-62 | ERF family protein |