PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774611.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 379aa MW: 42842.9 Da PI: 8.6062

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.9	3.6e-38	124	268	3	131
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesssssasns 85 k+drhski+T+ g+RdRR+Rls+++a+ fF Lqd+LG+dk+s t+eWLl qakp+ik+ ++ ++s+s++++++ + XP_022774611.1 124 SKRDRHSKISTANGPRDRRMRLSLDVARDFFGLQDMLGYDKASRTVEWLLIQAKPEIKKVARRqlsqvnqsfsvaAAKSPSSTSEGEVV------ 212 69***********************************************************76655554444322222222344444...... PP TCP 86 ssg............kaaksaakskksqksaasalnlakesrakarararertrekmr 131 + k ++ ++++k +q ++++ + +a++ r+karara+ rt+ k + XP_022774611.1 213 --SgidktaiggsisKGKPLTKEKKVRQPRKTTCRPFARDLREKARARAKARTTAKIM 268 ..144444555888644444445555555555679***************998865 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MFPSNSNGNN DPAAYIDQSI LHRHFSTDII PIPYSKQEDL PLSFFHFPSP YYNQLELKLE 60 DLDVFLQQHH DLLLHQHTLM TDNSVSETII NIPDSSKSEK STIHCTKTSH NATDQQVPRK 120 RSSSKRDRHS KISTANGPRD RRMRLSLDVA RDFFGLQDML GYDKASRTVE WLLIQAKPEI 180 KKVARRQLSQ VNQSFSVAAA KSPSSTSEGE VVSGIDKTAI GGSISKGKPL TKEKKVRQPR 240 KTTCRPFARD LREKARARAK ARTTAKIMWT LDESKICDDT RNSDLNEFSS WSSFETGEES 300 GIQDHNRNNP SLQAAVAEVK ELSSRDPEHI RIHGDMVDEA VAIMNTWSPN SIFNCLQNAG 360 INQEYQLTGF QSFGKPWEA

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MFPSNSNGNN DPAAYIDQSI LHRHFSTDII PIPYSKQEDL PLSFFHFPSP YYNQLELKLE  60
DLDVFLQQHH DLLLHQHTLM TDNSVSETII NIPDSSKSEK STIHCTKTSH NATDQQVPRK  120
RSSSKRDRHS KISTANGPRD RRMRLSLDVA RDFFGLQDML GYDKASRTVE WLLIQAKPEI  180
KKVARRQLSQ VNQSFSVAAA KSPSSTSEGE VVSGIDKTAI GGSISKGKPL TKEKKVRQPR  240
KTTCRPFARD LREKARARAK ARTTAKIMWT LDESKICDDT RNSDLNEFSS WSSFETGEES  300
GIQDHNRNNP SLQAAVAEVK ELSSRDPEHI RIHGDMVDEA VAIMNTWSPN SIFNCLQNAG  360
INQEYQLTGF QSFGKPWEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.2	2e-22	TCP family protein