PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022774331.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 209aa    MW: 24083.5 Da    PI: 9.7181
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022774331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.16.4e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien + rqvtfskRrng+lKKA+ELSvLCdaeva iifs++g+lye+ss
  XP_022774331.1  9 KRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAAIIFSPKGRLYEFSS 59
                    79***********************************************96 PP
2K-box79.58.2e-2782170997
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                       e+ +++ + e+a++ ++ie ++ +qR+llG++L+s+s++eLq++e+qLe+sl++iR++K++l++eqie+l+ ke+ l+een +L++k
  XP_022774331.1  82 EMERYTQQPELEAANMVRKIELIEASQRKLLGQGLGSCSVEELQEVESQLERSLRNIRARKDHLFMEQIEQLKAKERFLREENAKLSAK 170
                     45666788889***************************************************************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MVRGKVQMKR IENATSRQVT FSKRRNGLLK KAYELSVLCD AEVAAIIFSP KGRLYEFSSS  60
DMQKTIERYH KYAKGVKTDK PEMERYTQQP ELEAANMVRK IELIEASQRK LLGQGLGSCS  120
VEELQEVESQ LERSLRNIRA RKDHLFMEQI EQLKAKERFL REENAKLSAK SGGERWQPST  180
QQKETATYSS QSSLVETELF IGLPENRCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.31e-77MIKC_MADS family protein