PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774317.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 353aa MW: 37999.5 Da PI: 6.6804

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.7	6.1e-36	92	178	3	91
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaa 91 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a++ai+e+tgt++ +a ++ + + +ss k+ XP_022774317.1 92 AAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETISWLLEHAEQAIIEATGTGTVPAIAVsV--NGTLKIPASSG-KQD 178 5799***********************************************************9999955521..11111111111.111 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MECNHNQTIE EIDERINNNT AIIINEEQQE KQHHSNTTTP SFSASEATVM DPNQPMKEED 60 LTDSEPQEFT NPTLVHSLVQ VMPAAQTNRT LAAKRPSKDR HTKVEGRGRR IRMPATCAAR 120 IFQLTRELGH KSDGETISWL LEHAEQAIIE ATGTGTVPAI AVSVNGTLKI PASSGKQDAD 180 LARKRRKRRS SSEFIDVNEH LSSVSSGLAP IVPMTYSSVN VNPQGLVPIW HMGTLGVLPA 240 AAPGSNQAQL WAIPATATPF FNVAGRPISS FVSAMQPELQ DSSVGSMGSS VVPSSSSGAT 300 SVAGVSASSN GNNNSSISTT QMLREFSLEI LDKRELQFLG RPANHQTPCS KPS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MECNHNQTIE EIDERINNNT AIIINEEQQE KQHHSNTTTP SFSASEATVM DPNQPMKEED  60
LTDSEPQEFT NPTLVHSLVQ VMPAAQTNRT LAAKRPSKDR HTKVEGRGRR IRMPATCAAR  120
IFQLTRELGH KSDGETISWL LEHAEQAIIE ATGTGTVPAI AVSVNGTLKI PASSGKQDAD  180
LARKRRKRRS SSEFIDVNEH LSSVSSGLAP IVPMTYSSVN VNPQGLVPIW HMGTLGVLPA  240
AAPGSNQAQL WAIPATATPF FNVAGRPISS FVSAMQPELQ DSSVGSMGSS VVPSSSSGAT  300
SVAGVSASSN GNNNSSISTT QMLREFSLEI LDKRELQFLG RPANHQTPCS KPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	189	RKRRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	1e-74	TCP family protein