PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022774311.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 289aa MW: 33822.1 Da PI: 9.5471 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.00039 | 123 | 146 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C++C ksF +L +H + H XP_022774311.1 123 WRCGYCRKSFYEEKYLDKHFDNrH 146 58*****************77666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MKRFQIEIRE MRKWSKRVVF LFLCLSICLQ IPSVSSSTSP FQENEGHKES SAAGTLKLEH 60 EDAHIVHCSR ERSRSAWKII EEYLMPFVEK ERYKVSSGCR LHSDNDLFRD QEQHKLHVDI 120 NEWRCGYCRK SFYEEKYLDK HFDNRHFDFL NVSHGRCLAD LCGALHCDFV MDSAPRKTKC 180 NPAAAARNKH LCESLADSCF PVSNGPVSVR LHEFFLRQFC DAHTCARGPK PFSKGRKKRT 240 SILYISISIL TLMLLPLFYF FIYLYQRGIK RGSQELKRIL PSGRKKKPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63280.1 | 5e-98 | C2H2 family protein |