PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022774254.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family B3
Protein Properties Length: 573aa    MW: 65217 Da    PI: 10.443
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022774254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.39.2e-2135126199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkvl  sd+ ++g l +p kf++++g+    s  + l+ +sg  W+vkl  +k+  +++l++GW+eFv+ + L+  DfvvF+++g+  f  +v 
  XP_022774254.1  35 FFKVL-LSDAIQHGKLKIPAKFVRKYGSG--ISSPVFLKVPSGAIWQVKL--TKSNAEMWLQSGWREFVEHHSLELHDFVVFRYEGNCLF--NVV 122
                     77887.79******************765..4456***************..999999***************************98888..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f+k
  XP_022774254.1 123 IFDK 126
                     9987 PP
2B358.51.2e-18283378499
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     v+ ps+v++++ +++p +fa+++ +kk ++k l     +g+sW ++l     +kk+ r  l++GWkeF ++n+L++gD++vF+l+++++ +++v 
  XP_022774254.1 283 VMQPSYVTNRDHFYMPLTFARQYLMKK-QGKVL--CVFDGKSWHMELESdssNKKRFRPKLSNGWKEFSHDNNLDVGDVCVFELVKTTKITFNVV 374
                     7899*******************6665.44444..4567********7766566666699*************************9999999999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     vfr+
  XP_022774254.1 375 VFRS 378
                     9996 PP
3B364.71.4e-20454546299
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     fkv ++s +lk+g l lp  fa+++ +++++   ++  +   rsW v+l  + +s++ +lt+GW  F+k+n L+e D++vF+l++rs++ l+v++
  XP_022774254.1 454 FKVVVRSCSLKHGSLHLPAAFAKRYIMPETR---MVTLQVAERSWPVRL--KSYSSKSFLTSGWTVFAKENSLREDDTCVFELINRSDAVLRVSI 543
                     699999*******************878655...44455688*******..9999999************************************* PP

                     E-S CS
              B3  97 frk 99 
                     f++
  XP_022774254.1 544 FKH 546
                     987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
MSLMRKRSSK TPAMAFNSGQ RDHDSFYFTS TTPHFFKVLL SDAIQHGKLK IPAKFVRKYG  60
SGISSPVFLK VPSGAIWQVK LTKSNAEMWL QSGWREFVEH HSLELHDFVV FRYEGNCLFN  120
VVIFDKSASE IEYPINSCQT RAEIHNFEEH SQVPATEEDD DTSVEILDDM PPSKKRREKS  180
PLPSPRPSRK MRIHSNTKRT ESNATKVSAK RFEVPKRNRS SPWLTQGFSA RGSTAASESN  240
GGVNASQKQR HIWMQNTMKG KEKAKALQRA SSFKSQNPFC RAVMQPSYVT NRDHFYMPLT  300
FARQYLMKKQ GKVLCVFDGK SWHMELESDS SNKKRFRPKL SNGWKEFSHD NNLDVGDVCV  360
FELVKTTKIT FNVVVFRSEV EDSKSLDNGN GASLVKSTRS LVTNYASKSK GNFNQERRQK  420
TAGSQDGQGA SSLRTLDVFP ASSNFGPVPE DPNFKVVVRS CSLKHGSLHL PAAFAKRYIM  480
PETRMVTLQV AERSWPVRLK SYSSKSFLTS GWTVFAKENS LREDDTCVFE LINRSDAVLR  540
VSIFKHEEKA GARESADRKK RKMKGRNKED YLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174179KKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-49B3 family protein