PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774107.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 552aa MW: 62999.2 Da PI: 8.7825

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774107.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.6e-18	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+++++ G g+W++ ++ g++R++k+c++rw +yl XP_022774107.1 17 KGPWTPEEDKKLVKYIQENGHGSWRALPKLAGLNRCGKSCRLRWTNYL 64 79********************************************97 PP
2	Myb_DNA-binding	49.9	7.4e-16	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++ + lG++ W++Ia+++ gRt++++k++w+++l XP_022774107.1 70 RGKFSQEEEQTILNIHSILGNK-WSAIASHLH-GRTDNEIKNFWNTHL 115 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MLKLGRSPCC GEGGLKKGPW TPEEDKKLVK YIQENGHGSW RALPKLAGLN RCGKSCRLRW 60 TNYLRPDIKR GKFSQEEEQT ILNIHSILGN KWSAIASHLH GRTDNEIKNF WNTHLKKKLI 120 QMGIDPMTHR PRTDIFSSLP YLTALANLKE ILDQHPWEEQ AVRQQAEAVQ MAMLQCLQYL 180 LQTPASISYG SKNMHNTFTD METINLLNSL SPIKDNSVLS SLQQDVAATS FHDFNDSIPF 240 PRLTDLQIHC EYGTTKSKDT GQAQEYTVLS QVENKCNSPW LTPSATPSPY MIPPITEILI 300 NNLGDASCSS TYGGAAPSVW TDDHLIFEYP LFHELHPTIY ACFKAILPQF LAFLQAAPNN 360 NKPIAHSRCS NGRTWNLARK TKLVLRTYFL TNYLGREDKF GIRQLYSPLN DLLKFLHNDH 420 NEIFKARAYF VKIIEHALLQ ELSLKTCRCS QLAAGNDVAD LARGDMKAIV RDPEYMSISW 480 ESGWFYSFSY KGLTKFPTYL RLQVKDQFRI WDVKPYLTKA RAEFLESFGL GRVCWLSLPL 540 SKPNFDAFNK CG

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MLKLGRSPCC GEGGLKKGPW TPEEDKKLVK YIQENGHGSW RALPKLAGLN RCGKSCRLRW  60
TNYLRPDIKR GKFSQEEEQT ILNIHSILGN KWSAIASHLH GRTDNEIKNF WNTHLKKKLI  120
QMGIDPMTHR PRTDIFSSLP YLTALANLKE ILDQHPWEEQ AVRQQAEAVQ MAMLQCLQYL  180
LQTPASISYG SKNMHNTFTD METINLLNSL SPIKDNSVLS SLQQDVAATS FHDFNDSIPF  240
PRLTDLQIHC EYGTTKSKDT GQAQEYTVLS QVENKCNSPW LTPSATPSPY MIPPITEILI  300
NNLGDASCSS TYGGAAPSVW TDDHLIFEYP LFHELHPTIY ACFKAILPQF LAFLQAAPNN  360
NKPIAHSRCS NGRTWNLARK TKLVLRTYFL TNYLGREDKF GIRQLYSPLN DLLKFLHNDH  420
NEIFKARAYF VKIIEHALLQ ELSLKTCRCS QLAAGNDVAD LARGDMKAIV RDPEYMSISW  480
ESGWFYSFSY KGLTKFPTYL RLQVKDQFRI WDVKPYLTKA RAEFLESFGL GRVCWLSLPL  540
SKPNFDAFNK CG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	7e-93	MYB family protein