PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773760.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 370aa MW: 40830.2 Da PI: 7.0043

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	109.2	6.2e-34	48	192	2	136
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++ +++ ++ +++ + s+s++ +++++++ XP_022773760.1 48 FGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPLPPPGNFaLNHHMVLSTSQEAGASQSNKEG 142 689*************************************************************9988844445555555555444443333333 PP TCP 96 .kskksqksaasalnlakesr........akarararertrekmriknkl 136 k+ +s + + a l+ +s +k+++ +re t+ek + ++++ XP_022773760.1 143 lKTISSVNWEDPAEGLSTSSFwssdafwrSKSKEVSRETTNEKDNWNKSN 192 34444444444444444433344455555888888999999998888665 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MIASSKEVDS PTLQEGNTND TKVSQGPSSS SPWLRLKDPR IVRVSRAFGG KDRHSKVCTI 60 RGLRDRRVRL SVPTAIQLYD LQDRLGLNQP SKVVDWLLNA AKHEIDELPP LPLPPPGNFA 120 LNHHMVLSTS QEAGASQSNK EGLKTISSVN WEDPAEGLST SSFWSSDAFW RSKSKEVSRE 180 TTNEKDNWNK SNEEEKQEGS EGHHGAQVNS SDNILQRANH SSFPGLLNNS VPYGSYYHFE 240 PSNNFPLSHL GSHGFASHTE ELHNFNVVPL PSTLSLSPGS QILVCPPGAT QPLFPPHATA 300 SLEIDPRQQV NHFQMLSSGA QNLLPNSLNP PAYLSQSIRP SFHLSMTPRL PHSHNNSGSQ 360 PEKEQEFPSK

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MIASSKEVDS PTLQEGNTND TKVSQGPSSS SPWLRLKDPR IVRVSRAFGG KDRHSKVCTI  60
RGLRDRRVRL SVPTAIQLYD LQDRLGLNQP SKVVDWLLNA AKHEIDELPP LPLPPPGNFA  120
LNHHMVLSTS QEAGASQSNK EGLKTISSVN WEDPAEGLST SSFWSSDAFW RSKSKEVSRE  180
TTNEKDNWNK SNEEEKQEGS EGHHGAQVNS SDNILQRANH SSFPGLLNNS VPYGSYYHFE  240
PSNNFPLSHL GSHGFASHTE ELHNFNVVPL PSTLSLSPGS QILVCPPGAT QPLFPPHATA  300
SLEIDPRQQV NHFQMLSSGA QNLLPNSLNP PAYLSQSIRP SFHLSMTPRL PHSHNNSGSQ  360
PEKEQEFPSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.2	3e-45	TCP family protein