PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773749.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 540aa MW: 60507.9 Da PI: 7.2738

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	2e-05	46	68	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F +k L H+r H XP_022773749.1 46 FQCKACGKEFESKKALFGHMRHH 68 89*******************99 PP
2	zf-C2H2	12.5	0.00044	78	98	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg+ F + Lk H+ +H XP_022773749.1 78 CQECGRKFQSLKALKGHMTLH 98 ******************998 PP
3	zf-C2H2	13.9	0.00015	371	393	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC +C+k+F++++ L H+ H XP_022773749.1 371 YKCRICSKTFKSHHALGGHQTIH 393 9****************999888 PP
4	zf-C2H2	11.6	0.00088	453	475	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC++C k+F + L H r+H XP_022773749.1 453 YKCGICFKVFASGQALGGHKRSH 475 9******************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MEKNSGERKV MDDMDCQGYG LRDNPKKSWK SLGFADDGTT SSTLKFQCKA CGKEFESKKA 60 LFGHMRHHSG RERKRVDCQE CGRKFQSLKA LKGHMTLHPV KLRVSGDSGF GGSRQELALE 120 SITVRRKRSK TMRYNNAPNS SLSSLNESSG LVEIDQEVVD AALFLIMLSR GARNWSEFNS 180 FRESSDNDSE IKSLHQNKEI MQKENGNPFR DWDKSFQMKK LAMFKSDSDA SASMNVVYEK 240 NTSEYKELDS GIITDKEKKV GSEAPNDMLC RGVEFKVTKV DDESVFELYD TEIEERISGE 300 IMNFRSTEVE PGQDWMEGLD LAGLGSTKSS SCKYAMFDAC DAEPGGDSLN KLIRTPLNSE 360 MSDDSQKKNK YKCRICSKTF KSHHALGGHQ TIHRKRNSYA IEEIENREKI TQSGSSPETE 420 ASCKLVNVEY VENSVERELN GVTSYGTRVY KVYKCGICFK VFASGQALGG HKRSHILKEP 480 GTSDKQPAKQ LKFSDISDVT DLNLNLPVMH DEEANGDIGF KSCRVGSDCK SEALLSLVAN

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MEKNSGERKV MDDMDCQGYG LRDNPKKSWK SLGFADDGTT SSTLKFQCKA CGKEFESKKA  60
LFGHMRHHSG RERKRVDCQE CGRKFQSLKA LKGHMTLHPV KLRVSGDSGF GGSRQELALE  120
SITVRRKRSK TMRYNNAPNS SLSSLNESSG LVEIDQEVVD AALFLIMLSR GARNWSEFNS  180
FRESSDNDSE IKSLHQNKEI MQKENGNPFR DWDKSFQMKK LAMFKSDSDA SASMNVVYEK  240
NTSEYKELDS GIITDKEKKV GSEAPNDMLC RGVEFKVTKV DDESVFELYD TEIEERISGE  300
IMNFRSTEVE PGQDWMEGLD LAGLGSTKSS SCKYAMFDAC DAEPGGDSLN KLIRTPLNSE  360
MSDDSQKKNK YKCRICSKTF KSHHALGGHQ TIHRKRNSYA IEEIENREKI TQSGSSPETE  420
ASCKLVNVEY VENSVERELN GVTSYGTRVY KVYKCGICFK VFASGQALGG HKRSHILKEP  480
GTSDKQPAKQ LKFSDISDVT DLNLNLPVMH DEEANGDIGF KSCRVGSDCK SEALLSLVAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67450.1	9e-17	C2H2 family protein