PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773741.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 380aa MW: 41246.9 Da PI: 5.618

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++++lG g+W++ + + g+ R++k+c++rw +yl XP_022773741.1 14 KGPWTPEEDQKLLACIEELGHGSWSALPTKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.7	4.8e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E+e +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_022773741.1 67 RGNFSLQEEETIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MGRPPCCDKV GLKKGPWTPE EDQKLLACIE ELGHGSWSAL PTKAGLQRCG KSCRLRWTNY 60 LRPDIKRGNF SLQEEETIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG 120 IDPITHKPKT DALLSIDGQS KKAANLSHMA QWECARLEAE ARLVSESKMR SHSLQHQLNP 180 PGFAPSGSAS AAQLVNKTAW NSTTGIGGVL NTGLDAAGDL ESHTSSLTFS ENAPPIMSTG 240 LGVSSMPMVE FVGTTSGSAE TGIIKEEGEQ DWKGLGSSTN LPDYKEGMEI NSLSFTSSLH 300 DMTISMEGGW TPESLRPNSS QVNVGNINDS IDRSLSDNGK ESDENSGGGG DGSDYDEDNK 360 NYWNSILNLV NSSPSDSPMF

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MGRPPCCDKV GLKKGPWTPE EDQKLLACIE ELGHGSWSAL PTKAGLQRCG KSCRLRWTNY  60
LRPDIKRGNF SLQEEETIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG  120
IDPITHKPKT DALLSIDGQS KKAANLSHMA QWECARLEAE ARLVSESKMR SHSLQHQLNP  180
PGFAPSGSAS AAQLVNKTAW NSTTGIGGVL NTGLDAAGDL ESHTSSLTFS ENAPPIMSTG  240
LGVSSMPMVE FVGTTSGSAE TGIIKEEGEQ DWKGLGSSTN LPDYKEGMEI NSLSFTSSLH  300
DMTISMEGGW TPESLRPNSS QVNVGNINDS IDRSLSDNGK ESDENSGGGG DGSDYDEDNK  360
NYWNSILNLV NSSPSDSPMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-111	MYB family protein