PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773719.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 283aa MW: 32091.2 Da PI: 6.7938

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.1	1.3e-17	82	134	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ ++ +LAk lgL+ rq+ +WFqNrRa++k XP_022773719.1 82 KKRLNLEQVKALEKSFELGNKLEPGRKMQLAKALGLQPRQIAIWFQNRRARWK 134 4568889*********************************************9 PP
2	HD-ZIP_I/II	125.1	3.2e-40	80	170	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekk+rl+ eqvk+LE+sFe +kLep rK++la++Lglqprq+a+WFqnrRAR+ktkqlEkdyeaLk++++alk+++++L++++++L +el XP_022773719.1 80 EKKKRLNLEQVKALEKSFELGNKLEPGRKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKDYEALKKQLEALKADTDALQAQNKKLSAEL 170 69*************************************************************************************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MIFSIDMAFP PHAFLFQPYD DHDHLPSPTS LNSLPSFPPQ LFHCGAPFMM KRSVSFSGVE 60 KSEGVHGDDE LSDDGSHLGE KKKRLNLEQV KALEKSFELG NKLEPGRKMQ LAKALGLQPR 120 QIAIWFQNRR ARWKTKQLEK DYEALKKQLE ALKADTDALQ AQNKKLSAEL LSLKTKESNE 180 ISIKKENEGS WSNGSDNSCD VNLDFSRTTI ITSPPSSQLS SKHLFPSSIR PTSMTQPLQG 240 SSRPDLQCLK LDQVVQEESF CHMFNGVDEQ QGFWPWTEQQ NFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	137	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01220.1	6e-83	HD-ZIP family protein