PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773716.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 349aa MW: 39953.6 Da PI: 9.3973

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773716.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.6	3.5e-14	69	128	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse..ng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr+ A+++d s+ + k+ k+++lg ++ +e Aa+a++ a++k++g XP_022773716.1 69 SRFRGVSRHRWTGRYGAHLWDkLSWivTQrKKgKQVYLGAYDDEEAAARAYDLAALKYWG 128 789****************988899556445***********************98 PP
2	AP2	52.6	1.1e-16	171	222	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g XP_022773716.1 171 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 222 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MEMMVVKDEQ YLGRRRMFSA DGEVQVVRSV KRRRRHPASV ALAYDDNQGQ QPQQQYDQIN 60 AVTSVKRSSR FRGVSRHRWT GRYGAHLWDK LSWIVTQRKK GKQVYLGAYD DEEAAARAYD 120 LAALKYWGTS TFTNFPISDY ECEIEIMQTV TKEEYLASLR RKSSGFSRGV SKYRGVARHH 180 HNGRWEARIG RVFGNKYLYL GTYSTQEEAA RAYDIAAIEY RGINAVTNFD LSTYIRWLKP 240 GTNNVVAANE LVAMTEPESL QLTSSYSPRE ESKPSIYHSF ATDYMNSPQK QQVLESKIPV 300 NSYNKSSSPT ALGLLLRSSI FQELVEKNAN VSEDESSIDA DDEPKNQKD

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MEMMVVKDEQ YLGRRRMFSA DGEVQVVRSV KRRRRHPASV ALAYDDNQGQ QPQQQYDQIN  60
AVTSVKRSSR FRGVSRHRWT GRYGAHLWDK LSWIVTQRKK GKQVYLGAYD DEEAAARAYD  120
LAALKYWGTS TFTNFPISDY ECEIEIMQTV TKEEYLASLR RKSSGFSRGV SKYRGVARHH  180
HNGRWEARIG RVFGNKYLYL GTYSTQEEAA RAYDIAAIEY RGINAVTNFD LSTYIRWLKP  240
GTNNVVAANE LVAMTEPESL QLTSSYSPRE ESKPSIYHSF ATDYMNSPQK QQVLESKIPV  300
NSYNKSSSPT ALGLLLRSSI FQELVEKNAN VSEDESSIDA DDEPKNQKD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	14	35	RRRMFSADGEVQVVRSVKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-78	AP2 family protein