PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022773639.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 203aa MW: 23666.3 Da PI: 7.2758 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.8 | 1e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks+rqvtf kR+ng++KKAeEL vLCd+e a++ifs+tgkly +ss XP_022773639.1 9 KRIEDKSKRQVTFLKRKNGLIKKAEELAVLCDVELALLIFSPTGKLYQFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 49.7 | 1.6e-17 | 101 | 171 | 30 | 99 |
K-box 30 nLq.reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +Lq Rh G ++e L++ +L+ +e+qL++ l++ R++K++++++ + lq+kekel++en+++ k+++ XP_022773639.1 101 SLQeMVERHTEGHNIEHLNMTQLMLMEKQLDSILRQTRNRKTQVMMDTVAALQEKEKELRQENHNIDKEIA 171 4665778***********************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MGRRKLQLKR IEDKSKRQVT FLKRKNGLIK KAEELAVLCD VELALLIFSP TGKLYQFSSG 60 ESLKKILDRY LVHAGEEAAV CNSVNEAKIH EEFMDIWKGT SLQEMVERHT EGHNIEHLNM 120 TQLMLMEKQL DSILRQTRNR KTQVMMDTVA ALQEKEKELR QENHNIDKEI AARMDMEDGE 180 RVNQEPHSSI YEPPLQRGLL HLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30260.1 | 7e-41 | MIKC_MADS family protein |