PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022773575.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | Whirly | ||||||||
Protein Properties | Length: 241aa MW: 26565.5 Da PI: 9.7884 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 176.4 | 6.2e-55 | 64 | 201 | 2 | 137 |
Whirly 2 vyktkaalkvkavrptfealdsgn..lklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkal 94 vyk+kaa++v + +ptf+++dsg+ lk++r+G ++l++ +a++erkydWek+q+fals+tev++l+++++++ +effhdp++k+sn+G+v k l XP_022773575.1 64 VYKGKAAFSVSPLLPTFSKIDSGSasLKVDRRGCMMLTFWPAVGERKYDWEKRQKFALSPTEVGSLISMGAHDGSEFFHDPSMKSSNAGQVSKKL 158 9********************997225789***************************************************************** PP Whirly 95 kvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 ++ l G G++++l+vtn+++k+ne+f vP++ aefavl+++ XP_022773575.1 159 YIKALDGGNGYMISLTVTNNILKSNERFNVPLTTAEFAVLKTA 201 *****9999********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MMKLSRSLLS RRLCSQTMLS GKWVDVGDAL CSRAFESPAA FSTSVHDFSA KGISNARVFA 60 PYTVYKGKAA FSVSPLLPTF SKIDSGSASL KVDRRGCMML TFWPAVGERK YDWEKRQKFA 120 LSPTEVGSLI SMGAHDGSEF FHDPSMKSSN AGQVSKKLYI KALDGGNGYM ISLTVTNNIL 180 KSNERFNVPL TTAEFAVLKT ACSFALPHII GWDWLINQSR NDMAGSPSKV NPQLLDLEWD 240 K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 3e-85 | Whirly family protein |