PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773508.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 503aa MW: 56182.9 Da PI: 6.8869

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.3e-07	258	279	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_022773508.1 258 FCTICGKGFKRDANLRMHMRGH 279 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MDLKGELQKK VPQHPSFTNF NTQHQQKWED PSILDYSTRI EPPFQAFNQN SQTQSSLLCN 60 PHNQIKVPIQ DGPVNESLQA SKVQDWDPSA MLNNLSFLEQ KIHQLQDLVN LIIGRRDQVL 120 GRLDELVAQR QQLITADLTS IIVQLISTLG SLLPSVKHTL SASTPSLGQF GQFGEVVFPS 180 GQGLNDGVQP QNAGGSKVSE PPNSVEISNN SGNEQNLIIE EHELKDEEDT EEGENLLPGT 240 YEILQLEKEE ILAPHTHFCT ICGKGFKRDA NLRMHMRGHG DEYKTPAALA KPNKESSSEP 300 TLIKRYSCPY VGCKRNKGHK KFQPLKTILC VKNHYKRTHC DKSYICSRCN TKKFSVIADL 360 KTHEKHCGKD KWLCSCGTTF SRKDKLFGHI ALFQGHTPAI PLDETKGSNR PSDRGDANQA 420 TNKVGIMNFN FSSNVSSESG VQSNVDVKGG IDDPSGYFSP LNFDTYNFGG FHEFPRPPFD 480 DSDTSFAFLL TGFGNYTQKN RQD

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MDLKGELQKK VPQHPSFTNF NTQHQQKWED PSILDYSTRI EPPFQAFNQN SQTQSSLLCN  60
PHNQIKVPIQ DGPVNESLQA SKVQDWDPSA MLNNLSFLEQ KIHQLQDLVN LIIGRRDQVL  120
GRLDELVAQR QQLITADLTS IIVQLISTLG SLLPSVKHTL SASTPSLGQF GQFGEVVFPS  180
GQGLNDGVQP QNAGGSKVSE PPNSVEISNN SGNEQNLIIE EHELKDEEDT EEGENLLPGT  240
YEILQLEKEE ILAPHTHFCT ICGKGFKRDA NLRMHMRGHG DEYKTPAALA KPNKESSSEP  300
TLIKRYSCPY VGCKRNKGHK KFQPLKTILC VKNHYKRTHC DKSYICSRCN TKKFSVIADL  360
KTHEKHCGKD KWLCSCGTTF SRKDKLFGHI ALFQGHTPAI PLDETKGSNR PSDRGDANQA  420
TNKVGIMNFN FSSNVSSESG VQSNVDVKGG IDDPSGYFSP LNFDTYNFGG FHEFPRPPFD  480
DSDTSFAFLL TGFGNYTQKN RQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein