PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773056.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 293aa    MW: 31674 Da    PI: 6.5063
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11.1e-17204240135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cgt++  Tp++Rrgp+g+++LCnaCGl+++ kg+
  XP_022773056.1 204 CTHCGTSSksTPMMRRGPSGPRSLCNACGLFWANKGT 240
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MYGQSQPMNI PAHIASSVDN DVSASGSADN LHSVSYDAHT LDDGVGVEDV VTDPIYVTTA  60
PASASDLAIV QRADGASQLT LSFRGQVYVF DAITPDKFHA VLLLLGGCEL TSGPHGIEMS  120
SQNRRGVVDF PRGSNQPNRA ASLDRFRQKR KERCFDKKVK YSVRQEVALR MQRNKGQFTS  180
SKKSNEDFSW GTSQDDNNLL DTLCTHCGTS SKSTPMMRRG PSGPRSLCNA CGLFWANKGT  240
LRDIPKKTQD HSLTPVEQGE SEANDSDSGT AIPTQSNVVS FSNGDGSAII TEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.23e-82GATA family protein