PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022773045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | GATA | ||||||||
Protein Properties | Length: 333aa MW: 36693.5 Da PI: 4.4849 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49.9 | 4.5e-16 | 204 | 240 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_022773045.1 204 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 240 *******99*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MATANPQPRP FEEHERGTIQ IEDDDGDYED DAMDDEEDAN VNSVNVVEHG IGVVGGGGGA 60 GEGVVMASRT SELSLSFEGE VFVFPAITPE KVQAVLLLLG GRDIPTGVPT IEVPFDQNNR 120 DIGNIPNRSN LSRRIASLVR FREKRKERCF DKKIRYTIRR EVAQRMHRKN GQFASLKEST 180 SSWDSSQAGL QDGTPRPETV FWRCQHCGVS ENNTPAMRRG PAGPRTLCNA CGLMWANKGT 240 LRDLSKGGRN ISIDQTEPGN PSKEVTDGSN NASVNPDDKF HMLQDLHESA EDLTNSLPMG 300 IVHPFTDDDE QFCDLQEPLV EPANPSDTET DFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 3e-70 | GATA family protein |