PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772953.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TALE

Protein Properties

Length: 368aa MW: 42177.1 Da PI: 6.4561

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.2	3.3e-09	295	330	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_022772953.1 295 YKWPYPSETEKLALAESTGLDQKQINNWFINQRKRH 330 4679*****************************885 PP
2	ELK	37.9	3.8e-13	250	271	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s XP_022772953.1 250 ELKNHLLRKYSGYLSSLKQELS 271 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MEEYNQLNEN SPPRGNFLYA SHVLATNSSP YGRASSGSNV SNQQTQMPLS SFHLQSSEWY 60 QSEAHPIVKT EASTSQQGKK FHYPLFRGHQ AIHHQQEGNE SSSEVEAIKA KIIAHPQYSD 120 LLEAYMDCQK VGAPPEVVAR LAAARQEFEA RQRSSVTSKD TAKDPELDQF MEAYYDMLVK 180 YREELTRPIQ EALDFMRKIE TQLNMLSNGP VRIFNSDEKC EGVGSSEEDQ DNSGGETGLP 240 EIDPRAEDRE LKNHLLRKYS GYLSSLKQEL SKKKKKGKLP KEARQKLLSW WELHYKWPYP 300 SETEKLALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGLHPQNA ALYMDGHYMG 360 DGPFRLGP

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MEEYNQLNEN SPPRGNFLYA SHVLATNSSP YGRASSGSNV SNQQTQMPLS SFHLQSSEWY  60
QSEAHPIVKT EASTSQQGKK FHYPLFRGHQ AIHHQQEGNE SSSEVEAIKA KIIAHPQYSD  120
LLEAYMDCQK VGAPPEVVAR LAAARQEFEA RQRSSVTSKD TAKDPELDQF MEAYYDMLVK  180
YREELTRPIQ EALDFMRKIE TQLNMLSNGP VRIFNSDEKC EGVGSSEEDQ DNSGGETGLP  240
EIDPRAEDRE LKNHLLRKYS GYLSSLKQEL SKKKKKGKLP KEARQKLLSW WELHYKWPYP  300
SETEKLALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGLHPQNA ALYMDGHYMG  360
DGPFRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-137	TALE family protein