PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022772861.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | B3 | ||||||||
Protein Properties | Length: 227aa MW: 26012.2 Da PI: 10.3535 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.4 | 2e-16 | 128 | 217 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ +l lp +f++++ +k ++ +tl de+g ++ + rk++ l++GWk+F+ a++L +gD +vF+l++ + f +v XP_022772861.1 128 FIKSMLQSHVTGGFWLGLPVHFCKRNL-PK-RDEVMTLIDEEGHEYPTIYLARKTG----LSGGWKGFAVAHELVDGDALVFQLVRPTAF--KVY 214 89*********************9994.33.5568***************656665....************************987888..887 PP EE- CS B3 96 vfr 98 ++r XP_022772861.1 215 IIR 217 776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MVVDKQEWSY EECRRKRVEE NKKRMEALNL PQLSQALRTP SFKPSPKKQV KPRTVEKQLV 60 VVRRSGRVAN KSAPVYKEVL VEKVMIPRRI SKHRDLSNRV YASDEARADA LEKADKLESG 120 LEPDFPSFIK SMLQSHVTGG FWLGLPVHFC KRNLPKRDEV MTLIDEEGHE YPTIYLARKT 180 GLSGGWKGFA VAHELVDGDA LVFQLVRPTA FKVYIIRVKG PEQSNKL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 51 | RRKRVEENKKRMEALNLPQLSQALRTPSFKPSPKKQVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 1e-84 | B3 family protein |