PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022772780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 472aa MW: 49760 Da PI: 10.0623 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.3 | 1.3e-05 | 60 | 82 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022772780.1 60 FVCEICNKGFQRDQNLQLHRRGH 82 89*******************88 PP | |||||||
2 | zf-C2H2 | 14.7 | 9.2e-05 | 136 | 158 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k++ +s+ k Hi+ + XP_022772780.1 136 WKCERCSKRYAVQSDWKAHIKIC 158 58******************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence |
MTVSTASGEA SASSSGNQIQ GTQPTGGGPL KKKRNLPGMP DPDAEVIALS PKTLLATNRF 60 VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTSKEIRKRV YVCPEPSCVH HNPARALGDL 120 TGIKKHFCRK HGEKKWKCER CSKRYAVQSD WKAHIKICGT REYKCDCGTI FSRRDSFRTH 180 RAFCDALAEE RRIAESARAQ TLAIVNTKGN GKNVVGGGAA ATSPPPQPLT PSTTSIVSPR 240 LSIHSTENPR GLSSPTLAAT STSTSNSNVF ASIFAPNSQP AKIPAPSSIL QSTAPLERTS 300 LSLSSPLYLS NNGSFIFTGP EHDHCHYSPS PQPAMSATAL LQKAAQMGVA ASNPSLLRGL 360 GLAVSSTSAA DQEPNVKSES NWGTAGLGLG LPSNGSSGLT NPMIGSSSLF GNKPTTLDLL 420 GLGMDDGGAS SNGLSTLLTS FGGTFDVGAG GSSPRETSEG APERKSNSPA ML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 1e-108 | C2H2 family protein |