PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772780.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 472aa    MW: 49760 Da    PI: 10.0623
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772780.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.31.3e-056082123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C+k F r  nL+ H r H
  XP_022772780.1 60 FVCEICNKGFQRDQNLQLHRRGH 82
                    89*******************88 PP

2zf-C2H214.79.2e-05136158123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC+ C+k++  +s+ k Hi+ +
  XP_022772780.1 136 WKCERCSKRYAVQSDWKAHIKIC 158
                     58******************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MTVSTASGEA SASSSGNQIQ GTQPTGGGPL KKKRNLPGMP DPDAEVIALS PKTLLATNRF  60
VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTSKEIRKRV YVCPEPSCVH HNPARALGDL  120
TGIKKHFCRK HGEKKWKCER CSKRYAVQSD WKAHIKICGT REYKCDCGTI FSRRDSFRTH  180
RAFCDALAEE RRIAESARAQ TLAIVNTKGN GKNVVGGGAA ATSPPPQPLT PSTTSIVSPR  240
LSIHSTENPR GLSSPTLAAT STSTSNSNVF ASIFAPNSQP AKIPAPSSIL QSTAPLERTS  300
LSLSSPLYLS NNGSFIFTGP EHDHCHYSPS PQPAMSATAL LQKAAQMGVA ASNPSLLRGL  360
GLAVSSTSAA DQEPNVKSES NWGTAGLGLG LPSNGSSGLT NPMIGSSSLF GNKPTTLDLL  420
GLGMDDGGAS SNGLSTLLTS FGGTFDVGAG GSSPRETSEG APERKSNSPA ML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66730.11e-108C2H2 family protein