PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772645.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 741aa    MW: 81378.5 Da    PI: 5.8271
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS334.91.4e-1023817403374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +l++++Ae v +g+++ aq +Larl+++ sp g+p+qR+a+yf+eAL+  l++  + ++   pp++ ++ +++ ++ a+k+fsevsP+++f ++t
  XP_022772645.1 381 DLIYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLMN--NPVF-PPPPRSPTPFDVIFKMGAYKVFSEVSPFIQFVNFT 472
                     6899************************************************9..5565.45666666788************************ PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl..e 190
                     +Nqa+lea++ ++r+Hi+Dfdi+ G+QW++++q+L  R++g+pslRiT+++sp++++  el  ++e+L +fA+e+g++fe +vl  ++l++   +
  XP_022772645.1 473 CNQALLEALDDADRIHIVDFDIGFGAQWASFMQELPMRSRGAPSLRITAFASPSTHHLVELGLMRENLMQFANEIGLSFELEVLNFDSLDQTpyS 567
                     ************************************************************************************99998887557 PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     l ++r ++ Ea+aVn+ +   +  +++ +l++    +L++vk+lsPk+vv  +q +d+n+ +F +++++a++ y  l++sl+a    +s++ +k+
  XP_022772645.1 568 LPMFRSNEIEAVAVNFPI--WSSSKQPSALPN----LLRFVKQLSPKIVVTLDQGCDRNDLPFPQHIIHAFQLYINLLESLDAV-NVTSDAVNKI 655
                     778899999******999..444445666666....*********************************************665.579******* PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er+ll ++i++ v  +  +     e++  Wr  +++aGF+p+++s+++++qa+++l++ k+ g++ve++++slvl+W++r Lvs+SaWr
  XP_022772645.1 656 ERFLLVPRIESTVLGRWHA----PEKMPLWRTLFSSAGFTPLTFSNFTETQAECVLKRAKVSGFHVEKRQASLVLCWQQRDLVSASAWR 740
                     *************987777....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 741 aa     Download sequence    
MRRSQSPPTS ASTLSSSFNG GAAAAGGGGN SIDNTNTTAA TIAPPEIPLP NNNKEEWATE  60
LQPIPSELDL VPGPGGAQRC NLGLEDWETM LSESAVLPSQ DHSLLRWIAG DVDGYSFGLK  120
QLLQCGSTGP NQCLDFEGNA GSGVVDQGPG FDPIPCLVSS GPGNVVSSAA PNLGGFPGSG  180
FVPNSNKNGN GKIGSVMPSC SLVDAVNNHK VLGAPVGLNT SIQNPMFTSP GNSIGLPVSL  240
PVLYQHQQQD QYLESQEEKP QILNPQVLMG QPQHPQNPNF FLPLPQEQHL LQPLPKRLNP  300
GNLELSSQIP NLPFSDAGHE LFMRKQQQQH MGFPQGVQFV PQQKPLMVAK QKVLGPEEEM  360
AQQQQQHQYQ LYQQQQATLF DLIYKAAELV GTGNFSHAQG ILARLNHQLS PVGKPLQRAA  420
FYFKEALQLL LMNNPVFPPP PRSPTPFDVI FKMGAYKVFS EVSPFIQFVN FTCNQALLEA  480
LDDADRIHIV DFDIGFGAQW ASFMQELPMR SRGAPSLRIT AFASPSTHHL VELGLMRENL  540
MQFANEIGLS FELEVLNFDS LDQTPYSLPM FRSNEIEAVA VNFPIWSSSK QPSALPNLLR  600
FVKQLSPKIV VTLDQGCDRN DLPFPQHIIH AFQLYINLLE SLDAVNVTSD AVNKIERFLL  660
VPRIESTVLG RWHAPEKMPL WRTLFSSAGF TPLTFSNFTE TQAECVLKRA KVSGFHVEKR  720
QASLVLCWQQ RDLVSASAWR C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-116GRAS family protein