PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772524.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 817aa MW: 93041.6 Da PI: 8.5615

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	95.8	5.2e-30	135	222	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s ++s+r+g+i++r+ vCs+eg+r++ +++ +++r+r+ tr+gCka+++vkk+++gkw v+kl++eH+Hel+p XP_022772524.1 135 FYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRDASQN--RSKRQRTITRVGCKAQITVKKQTSGKWAVSKLVKEHTHELVP 222 9***************************************9988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MKWLKMRRTR CVLQLHITSK LKTLKPPLKY PQNSLSSFCP NGSYFALLIS VQQQQQQHPP 60 SPKSSSRESQ SNSQMDIRPV IDEFDDDATA LDLEHPIPFD HYNHALAQTL STLGDPNLEP 120 YEGMEFDSEQ AARIFYNSYA RRIGFSTRVS VYQRSRRDGS IICRQIVCSR EGFRRDASQN 180 RSKRQRTITR VGCKAQITVK KQTSGKWAVS KLVKEHTHEL VPPDKVHCLR SHRHVSGPAR 240 SLIDTLQAAG MGPSGVMSVL IKESGGINNV GFTKVDCQNY MSSSRQRKLG SGGQVVFDYL 300 KRMQNDDPAF FCAVQGDFGN STGNIFWADA PSRMNYNHFG DTVTFDTTYR TNRYRVPFAP 360 FTGWNHHGQP VLFGCALLLN ESESSFVWLF QTWLAAMSGR HPISITTDQD RIIRAAVAQV 420 FPGTRHRFCK WNVFREAQEK LSDVYHLHPS FEADFQRCIN LTETVDEFES CWESLLLKYS 480 LGENEWLQSM YNTRQHWVPV YLQDTFFGET YITQGIDIAN SYFDGYINAS TNAQVLIKQY 540 EKAVASRYEK EVKADYDTLN TAPALKTPSP MEKQAANLYT RKIFMKFQEE LVETLAYPAT 600 AIDDTGLEVM YRVAKFGEDH KAHFVKFSIF RKKASCSCQM FEFSGIICKH VLSVFRVTNV 660 LTLPSHYILK RWTRNAKSGV AVDGCAVEMQ SNSQVSYAAR YDNLCHEAIK FVGEGTESIH 720 TFLVAKDALH EASKKVASAK EHDSEVTKNI PLSTGQLLHS GFEDEEKKIQ ELSVELEDAS 780 RRCEGYRAKL VDVLKDMEEQ KLKMSVKVQN VRLILKG

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MKWLKMRRTR CVLQLHITSK LKTLKPPLKY PQNSLSSFCP NGSYFALLIS VQQQQQQHPP  60
SPKSSSRESQ SNSQMDIRPV IDEFDDDATA LDLEHPIPFD HYNHALAQTL STLGDPNLEP  120
YEGMEFDSEQ AARIFYNSYA RRIGFSTRVS VYQRSRRDGS IICRQIVCSR EGFRRDASQN  180
RSKRQRTITR VGCKAQITVK KQTSGKWAVS KLVKEHTHEL VPPDKVHCLR SHRHVSGPAR  240
SLIDTLQAAG MGPSGVMSVL IKESGGINNV GFTKVDCQNY MSSSRQRKLG SGGQVVFDYL  300
KRMQNDDPAF FCAVQGDFGN STGNIFWADA PSRMNYNHFG DTVTFDTTYR TNRYRVPFAP  360
FTGWNHHGQP VLFGCALLLN ESESSFVWLF QTWLAAMSGR HPISITTDQD RIIRAAVAQV  420
FPGTRHRFCK WNVFREAQEK LSDVYHLHPS FEADFQRCIN LTETVDEFES CWESLLLKYS  480
LGENEWLQSM YNTRQHWVPV YLQDTFFGET YITQGIDIAN SYFDGYINAS TNAQVLIKQY  540
EKAVASRYEK EVKADYDTLN TAPALKTPSP MEKQAANLYT RKIFMKFQEE LVETLAYPAT  600
AIDDTGLEVM YRVAKFGEDH KAHFVKFSIF RKKASCSCQM FEFSGIICKH VLSVFRVTNV  660
LTLPSHYILK RWTRNAKSGV AVDGCAVEMQ SNSQVSYAAR YDNLCHEAIK FVGEGTESIH  720
TFLVAKDALH EASKKVASAK EHDSEVTKNI PLSTGQLLHS GFEDEEKKIQ ELSVELEDAS  780
RRCEGYRAKL VDVLKDMEEQ KLKMSVKVQN VRLILKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein