PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772401.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family TCP
Protein Properties Length: 406aa    MW: 43100.4 Da    PI: 6.9373
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772401.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP130.51.6e-40811982102
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 
                     +++k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++  ++s +ss+s+ s +       
  XP_022772401.1  81 PAAKRPTKDRHTKVEGRGRRIRMPAFCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSSISVPsskpapl 175
                     5789*****************************************************************99987777777777333334445555 PP

             TCP  89 .........kaaksaakskksqk 102
                              +++ ++  + ++++
  XP_022772401.1 176 sfhsalgfyNSNGDESRRLSNNT 198
                     55555555422222223333333 PP

Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MESQSNKSNS SSDHHHHGQK QEASLQLVSS DSQSLVAAGG AHGTSSNQVQ APAHVPFMGS  60
ISNQIGVHSS SPTSTSSIPK PAAKRPTKDR HTKVEGRGRR IRMPAFCAAR VFQLTRELGH  120
KSDGETIEWL LQQAEPAIIA ATGTGTIPAN FSTLNVSLRS SGSSISVPSS KPAPLSFHSA  180
LGFYNSNGDE SRRLSNNTAG AAMLGFHHQL YPQILNPDAP MRSSNPNENY TTKPFREDLF  240
KETSQHNAET GGLDANSPKP ERTGMQDQEP GSFRAANLVP APAMWAVAPA TTNGGNAFWM  300
LPVGGGTMAS TTTPEAQMWT FPAHYSGGGR VNPVQLGSMI LQQQQTGGQQ LGLGVTETNM  360
GLLGSGINLY SDNNRFGLGM NSEQQHQENQ TQGSDSGDEN PATDSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72010.11e-63TCP family protein