PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022772401.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 406aa MW: 43100.4 Da PI: 6.9373 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 130.5 | 1.6e-40 | 81 | 198 | 2 | 102 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 +++k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+s+ s + XP_022772401.1 81 PAAKRPTKDRHTKVEGRGRRIRMPAFCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSSISVPsskpapl 175 5789*****************************************************************99987777777777333334445555 PP TCP 89 .........kaaksaakskksqk 102 +++ ++ + ++++ XP_022772401.1 176 sfhsalgfyNSNGDESRRLSNNT 198 55555555422222223333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 406 aa Download sequence |
MESQSNKSNS SSDHHHHGQK QEASLQLVSS DSQSLVAAGG AHGTSSNQVQ APAHVPFMGS 60 ISNQIGVHSS SPTSTSSIPK PAAKRPTKDR HTKVEGRGRR IRMPAFCAAR VFQLTRELGH 120 KSDGETIEWL LQQAEPAIIA ATGTGTIPAN FSTLNVSLRS SGSSISVPSS KPAPLSFHSA 180 LGFYNSNGDE SRRLSNNTAG AAMLGFHHQL YPQILNPDAP MRSSNPNENY TTKPFREDLF 240 KETSQHNAET GGLDANSPKP ERTGMQDQEP GSFRAANLVP APAMWAVAPA TTNGGNAFWM 300 LPVGGGTMAS TTTPEAQMWT FPAHYSGGGR VNPVQLGSMI LQQQQTGGQQ LGLGVTETNM 360 GLLGSGINLY SDNNRFGLGM NSEQQHQENQ TQGSDSGDEN PATDSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72010.1 | 1e-63 | TCP family protein |