PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022772297.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 270aa MW: 30209.4 Da PI: 7.8526 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.1 | 7.4e-06 | 113 | 132 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C k+F+r nL+ H+ XP_022772297.1 113 FSCHVCFKTFNRYNNLQMHM 132 89*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MEPSDISYDS DLVSSTNHTD IEPLDLFPGS MRSSLEPMPL LSCFLGSTET TMDENPKACS 60 ADEEDVNVAL QIALPDPSSS SMINPNSKEH ANGAAKQYWI PTPEQILIGF THFSCHVCFK 120 TFNRYNNLQM HMWGHGSQYR KGPESLKGTQ PRAMLGIPCY CCAEGCKNNI EHPRSKPLKD 180 FRTLQTHYKR KHGLKPFMCR KCGKLLAVKG DWRTHEKNCG KRWLCVCGSD FKHKRSLKDH 240 IKAFGSGHGP LPPSFDGVEV PEDTASSLHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34790.1 | 1e-116 | C2H2 family protein |