PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772297.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 270aa    MW: 30209.4 Da    PI: 7.8526
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.17.4e-06113132120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     ++C+ C k+F+r  nL+ H+
  XP_022772297.1 113 FSCHVCFKTFNRYNNLQMHM 132
                     89*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MEPSDISYDS DLVSSTNHTD IEPLDLFPGS MRSSLEPMPL LSCFLGSTET TMDENPKACS  60
ADEEDVNVAL QIALPDPSSS SMINPNSKEH ANGAAKQYWI PTPEQILIGF THFSCHVCFK  120
TFNRYNNLQM HMWGHGSQYR KGPESLKGTQ PRAMLGIPCY CCAEGCKNNI EHPRSKPLKD  180
FRTLQTHYKR KHGLKPFMCR KCGKLLAVKG DWRTHEKNCG KRWLCVCGSD FKHKRSLKDH  240
IKAFGSGHGP LPPSFDGVEV PEDTASSLHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.11e-116C2H2 family protein