PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022772252.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 686aa MW: 75215.4 Da PI: 6.7937

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022772252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	4e-16	330	389	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022772252.1 330 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 389 78*****************988886678446***********************98 PP
2	AP2	45.6	1.8e-14	434	483	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022772252.1 434 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 483 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MKSMNDNSNG INNNWLGFSL STHLKMEVAT GPQHRRHQYH HHSQDSAAVA AAATSVSNAI 60 PTSFYLSSHL NGSGICYGVG ESGGFHAPLP VMPLKSDGSL GIVESLSRSQ SEGIVPTSSP 120 KLEDFLGGAT METHQYESHE RETMALSLDS MYYHQNADQE TNRQHSLDHL QEPFRQQGQE 180 FPVHTHPYYS GLACQGMYQS PLEDETKDPQ LAVCDSQIPQ IGQDAMPCFK NWVARHYSTH 240 SSLEQQMTSS MVDDGAASGS VVAMGCGDLQ SLSLSMSPGS QSSCVTAPRQ ISSTATECVA 300 METKKRGPGK VGKNQPVHRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQSR 360 KGRQVYLGGY DMEEKAARAY DLAALKYWGP STHINFPLEN YREELEEMKN MSRQEYVAHL 420 RRKSSGFSRG ASMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK 480 FRGVNAVTNF DITRYDVERI VASNTLLAGE LARRNKETDS NNEANDYNTP KLTNGETIQP 540 EVNNGDESDW KMVLCESPQQ QPVGAVEPLD QKSVSTANCG NPAFSMALQG LIGVGSVSSS 600 PPMVDESTNV GTHYSNPSSL VTSVSNSREG SPDKTGSTML FAKPSLASKF ISPTNGVSWF 660 PSAAAQLRPA AISMAHLPLF AAWSDT

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MKSMNDNSNG INNNWLGFSL STHLKMEVAT GPQHRRHQYH HHSQDSAAVA AAATSVSNAI  60
PTSFYLSSHL NGSGICYGVG ESGGFHAPLP VMPLKSDGSL GIVESLSRSQ SEGIVPTSSP  120
KLEDFLGGAT METHQYESHE RETMALSLDS MYYHQNADQE TNRQHSLDHL QEPFRQQGQE  180
FPVHTHPYYS GLACQGMYQS PLEDETKDPQ LAVCDSQIPQ IGQDAMPCFK NWVARHYSTH  240
SSLEQQMTSS MVDDGAASGS VVAMGCGDLQ SLSLSMSPGS QSSCVTAPRQ ISSTATECVA  300
METKKRGPGK VGKNQPVHRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQSR  360
KGRQVYLGGY DMEEKAARAY DLAALKYWGP STHINFPLEN YREELEEMKN MSRQEYVAHL  420
RRKSSGFSRG ASMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK  480
FRGVNAVTNF DITRYDVERI VASNTLLAGE LARRNKETDS NNEANDYNTP KLTNGETIQP  540
EVNNGDESDW KMVLCESPQQ QPVGAVEPLD QKSVSTANCG NPAFSMALQG LIGVGSVSSS  600
PPMVDESTNV GTHYSNPSSL VTSVSNSREG SPDKTGSTML FAKPSLASKF ISPTNGVSWF  660
PSAAAQLRPA AISMAHLPLF AAWSDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-149	AP2 family protein