PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022772202.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NAC | ||||||||
Protein Properties | Length: 285aa MW: 31980.1 Da PI: 6.6699 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 88.1 | 1.6e-27 | 28 | 163 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyW 83 lppG+rF P++eel+++yL+ k ++ + ++ + i e+++y++eP+dLp+ + ++ ++F+ +++k g+ +r +k g+W XP_022772202.1 28 LPPGCRFYPSEEELLNHYLTGKNRSVSadradmCS-CDLIGELNLYDYEPSDLPEgacfvhG--YRGRKRHWFCYTESKG--GTSGRRRAKGGFW 117 79******************998877755555333.368***************55665322..3555677777777765..5566677799*** PP NAM 84 katgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 ++ gk ++vl ++ l g+++ +vfy+ + + +++t W+m ey+l XP_022772202.1 118 RKIGKVRDVLGGGNVLLGTRTKFVFYEVnSVKAAVRTPWIMYEYAL 163 ***********99999**********873556678*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MFNNQGSILP LIEIGGGDSS RTRSLRNLPP GCRFYPSEEE LLNHYLTGKN RSVSADRADM 60 CSCDLIGELN LYDYEPSDLP EGACFVHGYR GRKRHWFCYT ESKGGTSGRR RAKGGFWRKI 120 GKVRDVLGGG NVLLGTRTKF VFYEVNSVKA AVRTPWIMYE YALLHHLKAS FVLCRVFVKS 180 RAANSVSENV FSSCAEESVS AVHHISTQHH VFLTPDSLEA RINADDFTKE LHDPIATRPV 240 SVASFEFPSS IPPDLPDDLM GSRLTTNELL SIVEEDFIEL EDLRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 6e-22 | NAC family protein |