PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771611.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 975aa MW: 110217 Da PI: 8.9526

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.7	5.2e-10	7	54	10	57
HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 l++Le++++ ++yp+++e+e A+ lgLt +qVk WF R + k+ XP_022771611.1 7 LRLQALESFYKDENYPTQREMEGYAAALGLTLKQVKGWFVENRRRGKR 54 5699***********************************888877775 PP

Sequence ? help Back to Top
Protein Sequence Length: 975 aa Download sequence
MKRKSSLRLQ ALESFYKDEN YPTQREMEGY AAALGLTLKQ VKGWFVENRR RGKRDNGIML 60 PIHSMKKLAA PKEGNATGIS AARNSPKEQD LLVHSRSTSG DVLCSRYKST SLVSENRFGK 120 KKKKMLLPQD LFSPQYILKK VFRKDGPPLG VEFDSLPSQA FCHCQGSKDS HPADQECQRG 180 ATKRRKVPEL TTIDYQNNGN RSAPVKKHGI GKGLMTVWRV VNPEGGDLPT GVGFSNSQIV 240 APPQTSSLAV RRQPPRNKRR PPLVSLMKQR RLEKKLQGKR RPSIKRREVQ SNKDDNHRQP 300 SKEKCELALE GSISNECLDL LAMLVDDEEL ELRELQAGTN PLTCSDHLGT RGVLGCSLCK 360 DLLAKFPPNS VKMKQPFSMQ PWDSSPETVK KLFKVFHFLY TYSVTLDICL FTLDEFAQAF 420 HDKDSLLLGK IHVALLKLLL SDVEAELSAA LSRRFSLPCK FLALLHSVEN QEFVVEFWKT 480 SLNPLTWTEI LRQVLIAAGF GSTQGLLRRE ALSKNPGKAV AVRVANIPQY GSGAKIKGSS 540 SNQQNFPRPS WVYGGQRNGV QEAHTSSDSH PVDSSSITKF FEKEKCSGSR KDAKETEVGV 600 DIHPIQSVFL GSDRRYNRYW LFLGPCNAYD PGHRRVYFES SEDGHWEVID TEEALRTLLA 660 VLDDRGKREA LLIESLEKRE ASLYQQMSSR HLFDAGIRFM PSDSSEMDVG REDSLSPVSD 720 VDNLSLTVAM NESLTSSGAI VLEAGKKGEE QNRKWRRLQE FDVWIWDCFY LNLNAVKHSK 780 CSYLDSLTRC ESCHDLYWRD EKHCRICHAT FELDFDLEER YAIHVATCRE KGDNSMLPKF 840 KVLPSQLQSL KAAVHAIESV MPEDALIGAW TKSAHRLWVK RLRRTSSLSE LLQVVADFVA 900 AINKNWLNHC HIEQGGCTAI EEIIAFFPTM PETSSAVALW LVKLDQFIAP YLKKVHSEKE 960 LENQTRCSDT RAPKE

Sequence ? help Back to Top

Protein Sequence Length: 975 aa Download sequence

MKRKSSLRLQ ALESFYKDEN YPTQREMEGY AAALGLTLKQ VKGWFVENRR RGKRDNGIML  60
PIHSMKKLAA PKEGNATGIS AARNSPKEQD LLVHSRSTSG DVLCSRYKST SLVSENRFGK  120
KKKKMLLPQD LFSPQYILKK VFRKDGPPLG VEFDSLPSQA FCHCQGSKDS HPADQECQRG  180
ATKRRKVPEL TTIDYQNNGN RSAPVKKHGI GKGLMTVWRV VNPEGGDLPT GVGFSNSQIV  240
APPQTSSLAV RRQPPRNKRR PPLVSLMKQR RLEKKLQGKR RPSIKRREVQ SNKDDNHRQP  300
SKEKCELALE GSISNECLDL LAMLVDDEEL ELRELQAGTN PLTCSDHLGT RGVLGCSLCK  360
DLLAKFPPNS VKMKQPFSMQ PWDSSPETVK KLFKVFHFLY TYSVTLDICL FTLDEFAQAF  420
HDKDSLLLGK IHVALLKLLL SDVEAELSAA LSRRFSLPCK FLALLHSVEN QEFVVEFWKT  480
SLNPLTWTEI LRQVLIAAGF GSTQGLLRRE ALSKNPGKAV AVRVANIPQY GSGAKIKGSS  540
SNQQNFPRPS WVYGGQRNGV QEAHTSSDSH PVDSSSITKF FEKEKCSGSR KDAKETEVGV  600
DIHPIQSVFL GSDRRYNRYW LFLGPCNAYD PGHRRVYFES SEDGHWEVID TEEALRTLLA  660
VLDDRGKREA LLIESLEKRE ASLYQQMSSR HLFDAGIRFM PSDSSEMDVG REDSLSPVSD  720
VDNLSLTVAM NESLTSSGAI VLEAGKKGEE QNRKWRRLQE FDVWIWDCFY LNLNAVKHSK  780
CSYLDSLTRC ESCHDLYWRD EKHCRICHAT FELDFDLEER YAIHVATCRE KGDNSMLPKF  840
KVLPSQLQSL KAAVHAIESV MPEDALIGAW TKSAHRLWVK RLRRTSSLSE LLQVVADFVA  900
AINKNWLNHC HIEQGGCTAI EEIIAFFPTM PETSSAVALW LVKLDQFIAP YLKKVHSEKE  960
LENQTRCSDT RAPKE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	125	GKKKKKM
2	120	144	KKKKKMLLPQDLFSPQYILKKVFRK
3	121	145	KKKKKMLLPQDLFSPQYILKKVFRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-155	HB-other family protein