PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771608.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 1163aa MW: 131050 Da PI: 7.8645

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.4	6.4e-10	7	54	10	57
HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 l++Le++++ ++yp+++e+e A+ lgLt +qVk WF R + k+ XP_022771608.1 7 LRLQALESFYKDENYPTQREMEGYAAALGLTLKQVKGWFVENRRRGKR 54 5699***********************************888877775 PP

Sequence ? help Back to Top
Protein Sequence Length: 1163 aa Download sequence
MKRKSSLRLQ ALESFYKDEN YPTQREMEGY AAALGLTLKQ VKGWFVENRR RGKRDNGIML 60 PIHSMKKLAA PKEGNATGIS AARNSPKEQD LLVHSRSTSG DVLCSRYKST SLVSENRFGK 120 KKKKMLLPQD LFSPQYILKK VFRKDGPPLG VEFDSLPSQA FCHCQGSKDS HPADQECQRG 180 ATKRRKVPEL TTIDYQNNGN RSAPVKKHGI GKGLMTVWRV VNPEGGDLPT GVGFSNSQIV 240 APPQTSSLAV RRQPPRNKRR PPLVSLMKQR RLEKKLQGKR RPSIKRREVQ SNKDDNHRQP 300 SKEKCELALE GSISNECLDL LAMLVDDEEL ELRELQAGTN PLTCSDHLGT RGVLGCSLCK 360 DLLAKFPPNS VKMKQPFSMQ PWDSSPETVK KLFKVFHFLY TYSVTLDICL FTLDEFAQAF 420 HDKDSLLLGK IHVALLKLLL SDVEAELSAA LSRRFSLPCK FLALLHSVEN QEFVVEFWKT 480 SLNPLTWTEI LRQVLIAAGF GSTQGLLRRE ALSKEMSLMA RYALCPGSLK GVLFKILSER 540 GNNGLKVSDL ASSLPVTELN LTSTTEELKE LICSTLSSDI TLFEKISSSA YRLRSSVAKD 600 GSNCHSDNED SGSIDDDSDD SSDDSEYDLG DYYQRKLKHK NHYRSKNNML TVYTEIDESH 660 QGEVWLLGLM EGEYSDLSIE EKLNALVALI DLLSSGSSIR MENPGKAVAV RVANIPQYGS 720 GAKIKGSSSN QQNFPRPSWV YGGQRNGVQE AHTSSDSHPV DSSSITKFFE KEKCSGSRKD 780 AKETEVGVDI HPIQSVFLGS DRRYNRYWLF LGPCNAYDPG HRRVYFESSE DGHWEVIDTE 840 EALRTLLAVL DDRGKREALL IESLEKREAS LYQQMSSRHL FDAGIRFMPS DSSEMDVGRE 900 DSLSPVSDVD NLSLTVAMNE SLTSSGAIVL EAGKKGEEQN RKWRRLQEFD VWIWDCFYLN 960 LNAVKHSKCS YLDSLTRCES CHDLYWRDEK HCRICHATFE LDFDLEERYA IHVATCREKG 1020 DNSMLPKFKV LPSQLQSLKA AVHAIESVMP EDALIGAWTK SAHRLWVKRL RRTSSLSELL 1080 QVVADFVAAI NKNWLNHCHI EQGGCTAIEE IIAFFPTMPE TSSAVALWLV KLDQFIAPYL 1140 KKVHSEKELE NQTRCSDTRA PKE

Sequence ? help Back to Top

Protein Sequence Length: 1163 aa Download sequence

MKRKSSLRLQ ALESFYKDEN YPTQREMEGY AAALGLTLKQ VKGWFVENRR RGKRDNGIML  60
PIHSMKKLAA PKEGNATGIS AARNSPKEQD LLVHSRSTSG DVLCSRYKST SLVSENRFGK  120
KKKKMLLPQD LFSPQYILKK VFRKDGPPLG VEFDSLPSQA FCHCQGSKDS HPADQECQRG  180
ATKRRKVPEL TTIDYQNNGN RSAPVKKHGI GKGLMTVWRV VNPEGGDLPT GVGFSNSQIV  240
APPQTSSLAV RRQPPRNKRR PPLVSLMKQR RLEKKLQGKR RPSIKRREVQ SNKDDNHRQP  300
SKEKCELALE GSISNECLDL LAMLVDDEEL ELRELQAGTN PLTCSDHLGT RGVLGCSLCK  360
DLLAKFPPNS VKMKQPFSMQ PWDSSPETVK KLFKVFHFLY TYSVTLDICL FTLDEFAQAF  420
HDKDSLLLGK IHVALLKLLL SDVEAELSAA LSRRFSLPCK FLALLHSVEN QEFVVEFWKT  480
SLNPLTWTEI LRQVLIAAGF GSTQGLLRRE ALSKEMSLMA RYALCPGSLK GVLFKILSER  540
GNNGLKVSDL ASSLPVTELN LTSTTEELKE LICSTLSSDI TLFEKISSSA YRLRSSVAKD  600
GSNCHSDNED SGSIDDDSDD SSDDSEYDLG DYYQRKLKHK NHYRSKNNML TVYTEIDESH  660
QGEVWLLGLM EGEYSDLSIE EKLNALVALI DLLSSGSSIR MENPGKAVAV RVANIPQYGS  720
GAKIKGSSSN QQNFPRPSWV YGGQRNGVQE AHTSSDSHPV DSSSITKFFE KEKCSGSRKD  780
AKETEVGVDI HPIQSVFLGS DRRYNRYWLF LGPCNAYDPG HRRVYFESSE DGHWEVIDTE  840
EALRTLLAVL DDRGKREALL IESLEKREAS LYQQMSSRHL FDAGIRFMPS DSSEMDVGRE  900
DSLSPVSDVD NLSLTVAMNE SLTSSGAIVL EAGKKGEEQN RKWRRLQEFD VWIWDCFYLN  960
LNAVKHSKCS YLDSLTRCES CHDLYWRDEK HCRICHATFE LDFDLEERYA IHVATCREKG  1020
DNSMLPKFKV LPSQLQSLKA AVHAIESVMP EDALIGAWTK SAHRLWVKRL RRTSSLSELL  1080
QVVADFVAAI NKNWLNHCHI EQGGCTAIEE IIAFFPTMPE TSSAVALWLV KLDQFIAPYL  1140
KKVHSEKELE NQTRCSDTRA PKE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	125	GKKKKKM
2	120	144	KKKKKMLLPQDLFSPQYILKKVFRK
3	121	145	KKKKKMLLPQDLFSPQYILKKVFRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein