PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771228.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 505aa MW: 55726.7 Da PI: 6.1607

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.8e-13	359	405	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq XP_022771228.1 359 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 405 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MGEMFWLHEE DKAKVESVLG TEACEFLISL ASKNVLSELV TPPLSDLSVQ QRLCQIVDRS 60 NWNYAIFWQV SSLKSGGSVL VWGDGHCRDP KLGGVGDTST SGDGKLEGVE RKNEVKRLVL 120 QKLHSCFGGS EEDSYTAKVN GISDMEVFYL TSMYFTFHCD ASYGPGEAYK SGRSIWTSDV 180 NSCSDHYQSR SFLARSAGLQ TVVFIPVKSG VVELGSINLI PEEQNILEMV SPLFGGSSSV 240 QTKTIPKIFG RELSLGGSKS RSISINFSPK VEDESGFTLE SYDVQALGSN QIYGNSSNGC 300 RSDDGEAKLF PHLLVGGLNA QARNSGSEQT KDDSPSLPDE RKPRKRGRKP ANGREEPLNH 360 VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAITY ITDLQMKIRT LETEKEMVNN 420 TQKHLSGPDI DFQLRPEDAV VTMRCPLDAH PVSRVLKAFK ENQITAHESD VSTTDNEKVV 480 HTFTIRAPGG AAEQLKEKLV DAFSK

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MGEMFWLHEE DKAKVESVLG TEACEFLISL ASKNVLSELV TPPLSDLSVQ QRLCQIVDRS  60
NWNYAIFWQV SSLKSGGSVL VWGDGHCRDP KLGGVGDTST SGDGKLEGVE RKNEVKRLVL  120
QKLHSCFGGS EEDSYTAKVN GISDMEVFYL TSMYFTFHCD ASYGPGEAYK SGRSIWTSDV  180
NSCSDHYQSR SFLARSAGLQ TVVFIPVKSG VVELGSINLI PEEQNILEMV SPLFGGSSSV  240
QTKTIPKIFG RELSLGGSKS RSISINFSPK VEDESGFTLE SYDVQALGSN QIYGNSSNGC  300
RSDDGEAKLF PHLLVGGLNA QARNSGSEQT KDDSPSLPDE RKPRKRGRKP ANGREEPLNH  360
VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAITY ITDLQMKIRT LETEKEMVNN  420
TQKHLSGPDI DFQLRPEDAV VTMRCPLDAH PVSRVLKAFK ENQITAHESD VSTTDNEKVV  480
HTFTIRAPGG AAEQLKEKLV DAFSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	341	349	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	0.0	bHLH family protein