PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771158.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 436aa MW: 47867.8 Da PI: 9.4628

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	76	98	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022771158.1 76 FVCEICNKGFQRDQNLQLHKRGH 98 89******************988 PP
2	zf-C2H2	12.4	0.00048	152	174	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_022771158.1 152 WKCEKCSKIYAVQSDWKAHSKTC 174 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MFPAALSNSN SLSEEASVSS GTRVRDFGGV NPIVSTISPQ QQPQKIKKKR SLPGNPDPDA 60 EVIALSPKTL LATNRFVCEI CNKGFQRDQN LQLHKRGHNL PWKLKQRNGK EVKKKAYVCP 120 EPTCVHHHPS RALGDLTGIK KHYSRKHGEK KWKCEKCSKI YAVQSDWKAH SKTCGTREYR 180 CDCGTLFSRK DSFITHRAFC DALAEESARL SANQLASAAT NPAVIHHLPS HPNPNPNLSS 240 LFPFQTHLSL NPWVGPTQTS NPNPNNTLHV KPESHHFSPF FQEPPPPPPK ALITSPFQNL 300 HVSNNPPSNA ATPATPHLSA TALLQKAATV GATATQINNN NNMASHVSPD FLGFAAGNLV 360 TWQKSSDHFT RDFLGLTGDH HHHGGGNGNV NVSLNVRDVL TYAQGVELQH FERDQSLLKP 420 QGIGFTEPAS ETWGDC

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MFPAALSNSN SLSEEASVSS GTRVRDFGGV NPIVSTISPQ QQPQKIKKKR SLPGNPDPDA  60
EVIALSPKTL LATNRFVCEI CNKGFQRDQN LQLHKRGHNL PWKLKQRNGK EVKKKAYVCP  120
EPTCVHHHPS RALGDLTGIK KHYSRKHGEK KWKCEKCSKI YAVQSDWKAH SKTCGTREYR  180
CDCGTLFSRK DSFITHRAFC DALAEESARL SANQLASAAT NPAVIHHLPS HPNPNPNLSS  240
LFPFQTHLSL NPWVGPTQTS NPNPNNTLHV KPESHHFSPF FQEPPPPPPK ALITSPFQNL  300
HVSNNPPSNA ATPATPHLSA TALLQKAATV GATATQINNN NNMASHVSPD FLGFAAGNLV  360
TWQKSSDHFT RDFLGLTGDH HHHGGGNGNV NVSLNVRDVL TYAQGVELQH FERDQSLLKP  420
QGIGFTEPAS ETWGDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-110	C2H2 family protein