PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022771132.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | LFY | ||||||||
Protein Properties | Length: 391aa MW: 44082.8 Da PI: 8.3467 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 623.3 | 4.1e-190 | 1 | 377 | 1 | 386 |
FLO_LFY 1 mdpeafsas.lfkwdpraaaaapparlleeaavseapleaaaaaaarklr.....eleelfkayGvryltvakiaelGftvstLvdmkdeelddl 89 mdpeaf++ +fkwd+r ++a++par +e +s++p+++aa+aaa+ r ++ee+f+ayGvry+t++ki+elGftvstL++mk+eeld++ XP_022771132.1 1 MDPEAFTTGsFFKWDTRGVVAPTPARFMEAV-ASPQPQTVAAVAAAYMGRprelgGIEEFFQAYGVRYYTATKITELGFTVSTLLGMKEEELDEM 94 9****987559******99988888876655.555554555555555544556779*************************************** PP FLO_LFY 90 mkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseee 184 m+s+s+ifr++llvGeryGikaavraerrrleee+ ++rr+l+s d++++lda sq+glseepvq+ek+aagsgg+g ++e+v+a XP_022771132.1 95 MNSVSQIFRWELLVGERYGIKAAVRAERRRLEEED--SRRRHLVSGDTTSSLDAFSQQGLSEEPVQQEKQAAGSGGRG--TWEMVVAGG------ 179 *********************************88..99999********************************9998..999999983...... PP FLO_LFY 185 kkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPt 279 kkk+ ++r +k+l++e d+++e + d+e++ + erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iak++GekcPt XP_022771132.1 180 KKKQ----RRRMGQKKLVAEVDHEDELQGGIDDENGDGGDYERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKDHGEKCPT 270 2333....333344444555677777777777777777778****************************************************** PP FLO_LFY 280 kvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkL 374 kvtnqvfryakkaga yinkPkmrhYvhCYalhcLde+asnalrr fkergenvGawrqacykplvaia rqgwdida+fnahprL+iWYvPtkL XP_022771132.1 271 KVTNQVFRYAKKAGARYINKPKMRHYVHCYALHCLDEDASNALRRVFKERGENVGAWRQACYKPLVAIAGRQGWDIDAIFNAHPRLAIWYVPTKL 365 *********************************************************************************************** PP FLO_LFY 375 rqLChlerskas 386 rqLCh++r++a+ XP_022771132.1 366 RQLCHAARHSAA 377 ********9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 391 aa Download sequence |
MDPEAFTTGS FFKWDTRGVV APTPARFMEA VASPQPQTVA AVAAAYMGRP RELGGIEEFF 60 QAYGVRYYTA TKITELGFTV STLLGMKEEE LDEMMNSVSQ IFRWELLVGE RYGIKAAVRA 120 ERRRLEEEDS RRRHLVSGDT TSSLDAFSQQ GLSEEPVQQE KQAAGSGGRG TWEMVVAGGK 180 KKQRRRMGQK KLVAEVDHED ELQGGIDDEN GDGGDYERQR EHPFIVTEPG EVARGKKNGL 240 DYLFHLYEQC REFLIQVQNI AKDHGEKCPT KVTNQVFRYA KKAGARYINK PKMRHYVHCY 300 ALHCLDEDAS NALRRVFKER GENVGAWRQA CYKPLVAIAG RQGWDIDAIF NAHPRLAIWY 360 VPTKLRQLCH AARHSAAASR SISGGPDQMA F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 1e-149 | LFY family protein |