PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022771006.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 375aa MW: 42310.9 Da PI: 5.7338

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022771006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.3	6.3e-08	10	53	2	39
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 + r C+ +++ ++ l+C+ ++ lC +C e H+ H++ XP_022771006.1 10 QRRLCDYCNQPKALLYCRADSAKLCFSCDREVHSAnqlfsrHSR 53 6789****99*******************65677777776 PP
2	zf-B_box	30.5	7.5e-10	53	98	2	42
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg.....Htvvpl 42 + + C+ +++ ++++fCe+ q+ +C +C e+H+ H+++pl XP_022771006.1 53 RSQLCDSCDNSPASIFCETEQSVFCSNCDWESHRFssyslHDRRPL 98 5689*****************************7699999998875 PP
3	CCT	62.9	9.6e-22	331	374	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R a++RYkeK+ktR+++K+irYesRK++AesR R+KGrF+k + XP_022771006.1 331 RVSAISRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAKVE 374 8899*************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MTDQKNNQKQ RRLCDYCNQP KALLYCRADS AKLCFSCDRE VHSANQLFSR HSRSQLCDSC 60 DNSPASIFCE TEQSVFCSNC DWESHRFSSY SLHDRRPLEG FTGCPSVSEL VTFFGIEHLG 120 NKAPFSSEEK VGCGGGGEDD GLLDLMSWET PVISGFDDLI DSSDFDHGFN PTDVPPLPKN 180 RNASCGQHKE EILHQLRELA NSEPTLSFEK NDVEAIIGFH SLIPETDNLQ PGSVHTSCKY 240 DAYPISFPAC ESSPPPCFSD NVEMGNQVFL PFSQLRGCTE ESAMVPDKRL DSSRTIHVND 300 SLEDEQQHQI AAGTSSTLPR FAVHELNSQE RVSAISRYKE KKKTRRYDKH IRYESRKVRA 360 ESRTRIKGRF AKVED

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MTDQKNNQKQ RRLCDYCNQP KALLYCRADS AKLCFSCDRE VHSANQLFSR HSRSQLCDSC  60
DNSPASIFCE TEQSVFCSNC DWESHRFSSY SLHDRRPLEG FTGCPSVSEL VTFFGIEHLG  120
NKAPFSSEEK VGCGGGGEDD GLLDLMSWET PVISGFDDLI DSSDFDHGFN PTDVPPLPKN  180
RNASCGQHKE EILHQLRELA NSEPTLSFEK NDVEAIIGFH SLIPETDNLQ PGSVHTSCKY  240
DAYPISFPAC ESSPPPCFSD NVEMGNQVFL PFSQLRGCTE ESAMVPDKRL DSSRTIHVND  300
SLEDEQQHQI AAGTSSTLPR FAVHELNSQE RVSAISRYKE KKKTRRYDKH IRYESRKVRA  360
ESRTRIKGRF AKVED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	1e-101	CO-like family protein