PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770765.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 299aa MW: 34453.1 Da PI: 4.9747

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.1	2.4e-19	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd l+ +v+ +G g+W+++ar g++Rt+k+c++rw++yl XP_022770765.1 23 KGPWTEEEDSMLKAYVNIHGEGHWNSVARLSGLKRTGKSCRLRWLNYL 70 79********************************************97 PP
2	Myb_DNA-binding	46	1.2e-14	76	119	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ + E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_022770765.1 76 RGNISLREQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 6778889*************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MDVYERGFIP EIPHSEEEMD VRKGPWTEEE DSMLKAYVNI HGEGHWNSVA RLSGLKRTGK 60 SCRLRWLNYL RPEVRRGNIS LREQLLILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKQAKQLKY DVNSQQFRDA MRYVWIPRLI ERIRASSDSP SGQPSTNAAT TTTYIDSISN 180 ITTSQITYAK TIGSVQVDRS LMPELSGTSS DSLDTQVSSV TDLTDCYNPQ NVSNFPNNFQ 240 NGSGLYQENL TATWGRDDEV EFQATEEQSN GWLGGGDSMD TVWNEENIWF LQQQLYDEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	6e-82	MYB family protein