PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770750.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 986aa MW: 109067 Da PI: 6.1347

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132	2e-41	154	231	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ k+yhrrhkvCe+hska+++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_022770750.1 154 VCQVEDCGADLSNSKDYHRRHKVCEMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNP 231 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 986 aa Download sequence
MEARFGSEAH HFYGMNRADL RAVGKRTLEW DLNGWKWDGD LFIASSINPV SADSMGRQFF 60 PLASGIPGNS SNSSSSYSDE ANPETEKGKR ELEKKRRVIV VEDDSLNEEA SSLTLKLGGQ 120 GGHGNPISQR EMRNWEGTSG KKTKLSGGSG KCAVCQVEDC GADLSNSKDY HRRHKVCEMH 180 SKASKALVGN VMQRFCQQCS RFHVLQEFDE GKRSCRRRLA GHNKRRRKTN PDTIVNGNSV 240 NDEQTSGYLL LRLLRILSGM HSNGSDQTTD QDVLSNLLRS LANHNGEQGG RNITGVLPEP 300 QDSEAVSTLF SNGQGPPQPF KQHITEPASE MPQKGVRSCD TMGAKVQSNT AGAVKMNNFD 360 LNDIYVDLDE GTDDIERSPA PLNAGTSSLD CPSWVQQDSH QSSPPQTSRN SDSASAQSPS 420 SSSGDAQSRT DRIVFKLFGK EPNDFPLVLR AQILDWLSHS PTDIESYIRP GCIVLTIYLR 480 QAEAAWDELR GDLSFSLSRL LDSSDDTFWS TGWICIGVQD QIAFVYNGQV VIDTSLHLRS 540 NHYSEIISVK PIAISASERA QFSVKGINLS QPAIRLLCAV EGKYLVQAAT SELMDDNDDF 600 KEQDELQCVD FSCSIPTVTG RGFIEIEDHG FNSSFYPFIV AEDDVCSEIR MLENVLEIID 660 TDADVGRTGK MEAKNQAMAF IHEVGWLLHR SQLKSRLGQL DPNLEPFSLR RFKWLVEFSM 720 DHEWCAVVKK LLNILLDGIV DSGEQPSLNL ALTEMGLLHR AVRKNCRPLV ELLLRFVPDK 780 ASDRLGFENE TVAGGIHKSF LFKPDALGPA GLTPLHIAAG KDGSEDVLDA LTDDPGKVGI 840 DAWKSARDST GSTPEDYARL RGHYSYIHLV QKKINKRPPS GHVVVDIPGA FSDCSTNQKQ 900 NNKSTSSFEI GQLELRSMKQ HCKLCDQKLA SGYGTTSKSL VYRPAMLSMV AIAAVCVCVA 960 LLFKSYPEVL YVFRPFRWEL LDYGTS

Sequence ? help Back to Top

Protein Sequence Length: 986 aa Download sequence

MEARFGSEAH HFYGMNRADL RAVGKRTLEW DLNGWKWDGD LFIASSINPV SADSMGRQFF  60
PLASGIPGNS SNSSSSYSDE ANPETEKGKR ELEKKRRVIV VEDDSLNEEA SSLTLKLGGQ  120
GGHGNPISQR EMRNWEGTSG KKTKLSGGSG KCAVCQVEDC GADLSNSKDY HRRHKVCEMH  180
SKASKALVGN VMQRFCQQCS RFHVLQEFDE GKRSCRRRLA GHNKRRRKTN PDTIVNGNSV  240
NDEQTSGYLL LRLLRILSGM HSNGSDQTTD QDVLSNLLRS LANHNGEQGG RNITGVLPEP  300
QDSEAVSTLF SNGQGPPQPF KQHITEPASE MPQKGVRSCD TMGAKVQSNT AGAVKMNNFD  360
LNDIYVDLDE GTDDIERSPA PLNAGTSSLD CPSWVQQDSH QSSPPQTSRN SDSASAQSPS  420
SSSGDAQSRT DRIVFKLFGK EPNDFPLVLR AQILDWLSHS PTDIESYIRP GCIVLTIYLR  480
QAEAAWDELR GDLSFSLSRL LDSSDDTFWS TGWICIGVQD QIAFVYNGQV VIDTSLHLRS  540
NHYSEIISVK PIAISASERA QFSVKGINLS QPAIRLLCAV EGKYLVQAAT SELMDDNDDF  600
KEQDELQCVD FSCSIPTVTG RGFIEIEDHG FNSSFYPFIV AEDDVCSEIR MLENVLEIID  660
TDADVGRTGK MEAKNQAMAF IHEVGWLLHR SQLKSRLGQL DPNLEPFSLR RFKWLVEFSM  720
DHEWCAVVKK LLNILLDGIV DSGEQPSLNL ALTEMGLLHR AVRKNCRPLV ELLLRFVPDK  780
ASDRLGFENE TVAGGIHKSF LFKPDALGPA GLTPLHIAAG KDGSEDVLDA LTDDPGKVGI  840
DAWKSARDST GSTPEDYARL RGHYSYIHLV QKKINKRPPS GHVVVDIPGA FSDCSTNQKQ  900
NNKSTSSFEI GQLELRSMKQ HCKLCDQKLA SGYGTTSKSL VYRPAMLSMV AIAAVCVCVA  960
LLFKSYPEVL YVFRPFRWEL LDYGTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein