PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022770620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 245aa MW: 26910.2 Da PI: 9.395 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.3 | 1.9e-39 | 38 | 97 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + ++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s XP_022770620.1 38 PPEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 97 57899*****************************************************87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 245 aa Download sequence |
MDAAKWSQGL QDIGLVKPME EMVSNTCTRG MLERKTRPPE QLNCPRCNST NTKFCYYNNY 60 SLTQPRYFCK TCRRYWTEGG SLRNVPVGGG SRKNKRSTIS SSSSSSAAAK VPDLNPPSFS 120 QPKSHKSQDL NLAFPAMQES HALELLRTGM APRGLNSFIP APTPDSTTLY STGFSMQDYK 180 PILGFSIDGH GSRAGIHGVQ ENGGRLFFPF EEMKPISSTN EVDQNKGQGN SAGYWNNGML 240 GGGSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G61850.1 | 3e-75 | Dof family protein |