PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022770619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | Dof | ||||||||
Protein Properties | Length: 253aa MW: 27778 Da PI: 9.1917 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.2 | 2e-39 | 20 | 79 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + ++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s XP_022770619.1 20 PPEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 79 57899*****************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MEEMVSNTCT RGMLERKTRP PEQLNCPRCN STNTKFCYYN NYSLTQPRYF CKTCRRYWTE 60 GGSLRNVPVG GGSRKNKRST ISSSSSSSAA AKVPDLNPPS FSQPKSHKSQ DLNLAFPAMQ 120 ESHGMSQYLQ VSKIENNYSS SCNTSSPLSA LELLRTGMAP RGLNSFIPAP TPDSTTLYST 180 GFSMQDYKPI LGFSIDGHGS RAGIHGVQEN GGRLFFPFEE MKPISSTNEV DQNKGQGNSA 240 GYWNNGMLGG GSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.4 | 2e-73 | Dof family protein |