PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022770613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | Dof | ||||||||
Protein Properties | Length: 305aa MW: 33672.9 Da PI: 9.4952 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.8 | 2.8e-39 | 72 | 131 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + ++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s XP_022770613.1 72 PPEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 131 57899*****************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MDAAKWSQTI KAIFSFSFHS FSIIFMEGAS TISMRMINPF WKGLQDIGLV KPMEEMVSNT 60 CTRGMLERKT RPPEQLNCPR CNSTNTKFCY YNNYSLTQPR YFCKTCRRYW TEGGSLRNVP 120 VGGGSRKNKR STISSSSSSS AAAKVPDLNP PSFSQPKSHK SQDLNLAFPA MQESHGMSQY 180 LQVSKIENNY SSSCNTSSPL SALELLRTGM APRGLNSFIP APTPDSTTLY STGFSMQDYK 240 PILGFSIDGH GSRAGIHGVQ ENGGRLFFPF EEMKPISSTN EVDQNKGQGN SAGYWNNGML 300 GGGSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.4 | 4e-74 | Dof family protein |