PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770596.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 706aa MW: 78548.6 Da PI: 7.1314

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770596.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.4	1.4e-23	130	230	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+lt sd++++g +++ +k+a+e +++ + +++lt +d++g +W++k+i+r++++r++lt+GW+ Fv ++L +gD +vF + +++ XP_022770596.1 130 FCKILTASDTSTHGGFSVLRKHATESlppldMSQATPTQELTAKDLHGHEWRFKHIFRGQPRRHLLTTGWSTFVTNKRLVAGDAFVFL--RGDNG 222 99*******************9999555566679********************************************..34899 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_022770596.1 223 ELRVGVRR 230 99**98 PP
2	Auxin_resp	105.5	6e-35	256	335	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha++t++ F v+Y+Pr+ s+F++ v+k+++a+++++svGmRfkm+fe+e+s+err++Gt+vgv d++p +W++SkWrsLk XP_022770596.1 256 AAHAVTTHTLFVVYYKPRT--SQFIIGVNKYLEAINNRFSVGMRFKMRFEGEESPERRFTGTIVGVGDISP-HWSESKWRSLK 335 79**************6..9*******************************************99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MAHVEGNPRV SSIAHEESGV GVDDLYPELW ELCAGPLVEI PRVHERVFYF PQGHMEQLEA 60 STNQELNNQA PLFNLPSKIL CRVLHFQLLA EKETDEVYAQ ITLQPEVDQS EPTSPDPCPT 120 EAPKMTVHSF CKILTASDTS THGGFSVLRK HATESLPPLD MSQATPTQEL TAKDLHGHEW 180 RFKHIFRGQP RRHLLTTGWS TFVTNKRLVA GDAFVFLRGD NGELRVGVRR LARQQSTMPS 240 SVISSQSMHL GVLATAAHAV TTHTLFVVYY KPRTSQFIIG VNKYLEAINN RFSVGMRFKM 300 RFEGEESPER RFTGTIVGVG DISPHWSESK WRSLKIQWDE PATIQRPERV SPWEIEPFVA 360 SASINLVQPA VKSKRPRPVD IPASEITTNS AGSAFWCRGS TQSHQLTRGG STPDVQSSES 420 KVMWSMRQKE IDNSLINSSG GYNPRTRPEN AWPPSPHMNV SLNLFPDSID DSNKTGTPQT 480 VLAGYASSVQ SRQSKGLMHD QVEKGKKSKI STGCRLFGFN LTDSTSASVP PDKEQASTTV 540 DYNGVRGLIP AASHIDQNPE TLKSSKEQRQ VASETSTKEK QAKQGAATSM RTRTKVHMQG 600 IAVGRAVDLT VLKGYDDLVN ELEKMFDIKG ELCPHGKWSV IFTDDEGDMM LLGDDPWVEF 660 CKMVRKIFIY SSEEVKKISA RCKFPASSLE GEGTVVSLDS EHRSET

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MAHVEGNPRV SSIAHEESGV GVDDLYPELW ELCAGPLVEI PRVHERVFYF PQGHMEQLEA  60
STNQELNNQA PLFNLPSKIL CRVLHFQLLA EKETDEVYAQ ITLQPEVDQS EPTSPDPCPT  120
EAPKMTVHSF CKILTASDTS THGGFSVLRK HATESLPPLD MSQATPTQEL TAKDLHGHEW  180
RFKHIFRGQP RRHLLTTGWS TFVTNKRLVA GDAFVFLRGD NGELRVGVRR LARQQSTMPS  240
SVISSQSMHL GVLATAAHAV TTHTLFVVYY KPRTSQFIIG VNKYLEAINN RFSVGMRFKM  300
RFEGEESPER RFTGTIVGVG DISPHWSESK WRSLKIQWDE PATIQRPERV SPWEIEPFVA  360
SASINLVQPA VKSKRPRPVD IPASEITTNS AGSAFWCRGS TQSHQLTRGG STPDVQSSES  420
KVMWSMRQKE IDNSLINSSG GYNPRTRPEN AWPPSPHMNV SLNLFPDSID DSNKTGTPQT  480
VLAGYASSVQ SRQSKGLMHD QVEKGKKSKI STGCRLFGFN LTDSTSASVP PDKEQASTTV  540
DYNGVRGLIP AASHIDQNPE TLKSSKEQRQ VASETSTKEK QAKQGAATSM RTRTKVHMQG  600
IAVGRAVDLT VLKGYDDLVN ELEKMFDIKG ELCPHGKWSV IFTDDEGDMM LLGDDPWVEF  660
CKMVRKIFIY SSEEVKKISA RCKFPASSLE GEGTVVSLDS EHRSET

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	374	378	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61830.1	0.0	ARF family protein