PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770247.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 724aa    MW: 79418.6 Da    PI: 6.0127
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS341.81.2e-1043677232374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++L+++ e +++g+  la+ +Larl+++ sp g+p+ R+a+yf+eAL+  l        ++ +p++ s++n++ ++ a+k fse+sPi++f+++
  XP_022770247.1 367 IDQLIQASELIETGNPVLAHGILARLNHQLSPVGKPFIRAAFYFKEALSLLLRL------NTTSPWALSTYNMIFKIGAYKSFSEISPIVQFANF 455
                     689**********************************************99987......8899******************************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     t+Nqa+le +eg++r+HiiDfdi +G+QW++L+q+L  R++g+psl+iT+++sp+++++ el  t+++L++fA+e+++ fef++ ++ ++ + + 
  XP_022770247.1 456 TCNQALLEVFEGCSRIHIIDFDIAYGGQWASLMQELVLRNGGAPSLKITAFASPSTHDELELGFTRDNLKHFASEINIAFEFEI-MSLDFLNSSS 549
                     ***********************************************************************************9.5777777788 PP

            GRAS 192 eeL..rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++L  ++ ++Ea+aVnl +  ++ +      +s+ + vL++vk+lsPk+vv  ++ +d+++ sF +++++al+ ys+l++sl+a    + ++ +k
  XP_022770247.1 550 WSLplHLPENEAIAVNLPIGSFSNY------PSTLPLVLRFVKQLSPKIVVSLDRGCDRTDVSFPHHIIHALQSYSSLLESLDAV-NMNLDALQK 637
                     887447777**********888877......445567*********************************************776.4567999** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +Er+ll++ i+++v  ++++     e+  +Wr+ + ++GF p+++s+++++qa++l+++++ +g++ve+++ +lvl+W++r+L+++SaWr
  XP_022770247.1 638 IERFLLRPGIEKIVLGRHRS----PERTPSWRSLFVQSGFFPLTFSNFTESQAECLVQRTPIKGFHVEKRQSALVLCWQRRELIAASAWR 723
                     ***************99998....9999*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 724 aa     Download sequence    
MPLPSEEFQR KGALDFSSST SSCSGSSLLI QNQHHHQQEE EEEKWQNNKE GCCYVGSEPT  60
SVLDTRRSPS PPTSSSTLSS SLGGGGSGAS TDTTGVAATT AVSGKNNNGQ SVDFGTEKCG  120
LGMEDWESVL SGSPSQEQSI LKLIMGDVED PSIGLNKILQ SGGGSQDMEL FNAGFGVVDQ  180
GFTFESITSG GNLVSNIDPP LTGSSSDFTR LGTVSTPTNP VFTSSPPNLL PTSLPPGAFS  240
QQQHLQPLEA LDEKPQIFNP QVTINQNQAQ FTQNQAMHLP LSCAQLQEHH LLSPPPQKRL  300
NSGSSGPNYQ VHKFPFSGSG QELYVRRQQQ QLQMLQQRPT TIGMAATAKP KIVSDELANQ  360
QLQQAIIDQL IQASELIETG NPVLAHGILA RLNHQLSPVG KPFIRAAFYF KEALSLLLRL  420
NTTSPWALST YNMIFKIGAY KSFSEISPIV QFANFTCNQA LLEVFEGCSR IHIIDFDIAY  480
GGQWASLMQE LVLRNGGAPS LKITAFASPS THDELELGFT RDNLKHFASE INIAFEFEIM  540
SLDFLNSSSW SLPLHLPENE AIAVNLPIGS FSNYPSTLPL VLRFVKQLSP KIVVSLDRGC  600
DRTDVSFPHH IIHALQSYSS LLESLDAVNM NLDALQKIER FLLRPGIEKI VLGRHRSPER  660
TPSWRSLFVQ SGFFPLTFSN FTESQAECLV QRTPIKGFHV EKRQSALVLC WQRRELIAAS  720
AWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-151GRAS family protein