PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770124.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 244aa    MW: 27813.8 Da    PI: 8.9373
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770124.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF916e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien   rqvtfskRr+g+lKKA ELS+LCdaevaviifs+tgkl+e+ss
  XP_022770124.1  9 KRIENANSRQVTFSKRRAGLLKKARELSILCDAEVAVIIFSNTGKLFEFSS 59
                    79***********************************************96 PP
2K-box57.17.8e-2078163587
           K-box   5 sgksleeakaeslqqelakLkkeienLqreq...RhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 
                     +  ++e++ +++ ++e+++Lk+ei +Lq +q   R+llG++L s+s+keLq LeqqL+++l ++++kK++ll+eq+e+++ + +el
  XP_022770124.1  78 EIAQVENKVEKQDSKEADNLKDEIAKLQMKQsfyRQLLGKNLISMSMKELQLLEQQLNEGLLSVKEKKEQLLMEQLEQSRLQVEEL 163
                     3444778888999***************655455**********************************************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KARELSILCD AEVAVIIFSN TGKLFEFSSS  60
GMKKTISRYN KCSQGSSEIA QVENKVEKQD SKEADNLKDE IAKLQMKQSF YRQLLGKNLI  120
SMSMKELQLL EQQLNEGLLS VKEKKEQLLM EQLEQSRLQV EELRGFFPLT DRPVQSYLEC  180
YPVERKNSLM SHSIPSTDVT CNCTVEKGDS DTALYLGLPS NHHKRKKPER ETNSNDSESQ  240
LGLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.11e-62MIKC_MADS family protein