PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022770084.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 309aa    MW: 33514.4 Da    PI: 9.0047
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022770084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.48.6e-32141197158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq Rak+e ekk+ +k rkpylheSRh hA+rR+Rg+gGrF
  XP_022770084.1 141 EEPVFVNAKQYHGILRRRQIRAKAELEKKV-IKVRKPYLHESRHLHAMRRARGCGGRF 197
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MPAKPGNKDQ RMDHGAQSVL QSTAYSEPWW KGVAPNPFGE AASKSTFIEQ LKGSVADGAV  60
HSQAHGGMGN GDIDAVIVLG SDGRNGQDRQ HLKHVPSKGP VSFGEHLEPN SQMELVGHSI  120
VSPHLYGMLH ARMPLPLQME EEPVFVNAKQ YHGILRRRQI RAKAELEKKV IKVRKPYLHE  180
SRHLHAMRRA RGCGGRFLNT KKVDDDVTSS TSEKGINSDE NVSTKSAHLS QSVCVSANGT  240
GNLNSFYVQQ EGNGSLVQDM HKAQPLANGN SNGRGLSLAY HSSSNDAVEG NYFGQQRDIV  300
EGNGAPSIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.21e-38NF-YA family protein