PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022770015.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 1658aa MW: 187902 Da PI: 9.0827

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022770015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00037	1567	1589	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H XP_022770015.1 1567 CPvkGCGKKFFSHKYLVQHRRVH 1589 9999*****************99 PP
2	zf-C2H2	11.6	0.00086	1625	1651	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_022770015.1 1625 YVCAeeGCGQTFRFVSDFSRHKRKtgH 1651 89********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1658 aa Download sequence
MAASNLSPEP SQEVFSWLKS LPLAPEYRPS LAEFQDPIAY IFKIEKEASQ YGICKIIPPV 60 PPAPKRTAIG NLNRSLVARA AANASSDSKP APTFTTRQQQ IGFCPRKQRP VQKPVWQSGE 120 YYTFQEFEAK AKSFERNYLK RYSKKGSLSA LEVETLFWKA TVDKPFSVEY ANDMPGSAFV 180 PLDSKKSSVG GREAGEGVTV GETPWNMRAV SRAKGSLLRF MKEEIPGVTS PMVYIAMLFS 240 WFAWHVEDHD LHSLNYLHMG AAKTWYGVPR DAAVAFEEVV RVDGYAGEFN PLVTFSTLGE 300 KTTVMSPEVF ICAGVPCCRL VQNAGEFVVT FPRAYHSGFS HGFNFGEAAN IATPEWLRVA 360 RDAAIRRASI NYPPMVSHFQ LLYDLALELC SRVPMSIGAK PKSSRLKDKN KSEGETLVKK 420 LFVQNLIQNN DLLHILGKGS SVVLLPKCSS DSSLCSELRV ASQLRTNPRI SLGLCNYKEV 480 RESSETLASD EIMLGRSEEI KAVKGFYSVK GKFVTIYEGN RDSSFRGTDY TCRLPTQTLN 540 TNIERESAVQ ADALSDQRLF SCVTCGILCF DCIAVLQPTE QAARYLMSAD CSFFNDWTVG 600 SGLTHDGFTA AHGDAITSEQ NPCTRRINRS APNALYDVPV QSVEYKFQMV DQTNQVVEDT 660 KEGGDTSALG LLASAYGNSS DSEDHVEPNA TVFGDETSSA NTSPGRKFQY NGSGFSPGNA 720 NRSHTSSLSR LDSEEEAPIH VTDSCSEPGS RRVDIKYRSP QTVDRAVEFE TDNLASGRSN 780 SLEDKFRDPI TVSHANPSCS PATHGTEKMR CSKAIAPMEN ADIPYAPRSD EDSSRMHVFC 840 LEHAVEAEQQ LRQIGGVHVF LLCHPEYPKI EAEAKLVAEE LEIDYQWNDI LFGDATKDDE 900 ERIHSALDSE DALHGNGDWA VKLGINLFYS ANLSRSTLYS KQMPYNCVIY SAFGRKSPAS 960 SPTKLNRYGR RSSKQKKVVA GKWCGKVWMS NQVHPFLAQR DPDEQEQERC FHAWATSDEN 1020 LERKRENVQK AETTKVAKVF NRKRKMRAEI APSKKVTCIE PQGAVSDDSL DGSSLRQQQR 1080 FFRGKQPRLI EKEEAISYDS LEDDSLLLCR NLSRRKQAKF LEREAAESED EEEDFNAQQH 1140 WRNLRGKQGK YFEEDDVVSG DSLDESSLKQ YRRIRRSRQA KFMEVEDAVS DDEQEEISHQ 1200 LQRRIPRGRQ IKSFERNDAI SDYSRADNAL KQYRRISKGK HPKFFERDYA MSDDASDDDS 1260 QRHLRRIPRG KHMKRMERDY AFSDDSLEDN PQQQHRRRSK VAKYTDREVV VSFGPLKGNS 1320 HQQHRKVPRS KRTKYIERED AVLSDSPGDS SLQQLRRIAR SKHTKILKRE DAVSDDSLDD 1380 TSPKQLRKTP RSRQGKFIER ENAVSYDSLE ENYHQPNRNL RSRKKKAQTP RQIQQETPQN 1440 VKQGKRRTTK QVVSQQMKLE TPRNRNTKIE QSARQCNSYG EDEIEGGPST RLRKRVRKPL 1500 KESEAKPKEK KQASKKKVKN ASNVKTLAGH NTAKVKDEEA EYQCDMEGCT MSFGLKQELV 1560 LHKRNICPVK GCGKKFFSHK YLVQHRRVHI DDRPLKCPWK GCKMTFKWAW ARTEHIRVHT 1620 GARPYVCAEE GCGQTFRFVS DFSRHKRKTG HSTKKARG

Sequence ? help Back to Top

Protein Sequence Length: 1658 aa Download sequence

MAASNLSPEP SQEVFSWLKS LPLAPEYRPS LAEFQDPIAY IFKIEKEASQ YGICKIIPPV  60
PPAPKRTAIG NLNRSLVARA AANASSDSKP APTFTTRQQQ IGFCPRKQRP VQKPVWQSGE  120
YYTFQEFEAK AKSFERNYLK RYSKKGSLSA LEVETLFWKA TVDKPFSVEY ANDMPGSAFV  180
PLDSKKSSVG GREAGEGVTV GETPWNMRAV SRAKGSLLRF MKEEIPGVTS PMVYIAMLFS  240
WFAWHVEDHD LHSLNYLHMG AAKTWYGVPR DAAVAFEEVV RVDGYAGEFN PLVTFSTLGE  300
KTTVMSPEVF ICAGVPCCRL VQNAGEFVVT FPRAYHSGFS HGFNFGEAAN IATPEWLRVA  360
RDAAIRRASI NYPPMVSHFQ LLYDLALELC SRVPMSIGAK PKSSRLKDKN KSEGETLVKK  420
LFVQNLIQNN DLLHILGKGS SVVLLPKCSS DSSLCSELRV ASQLRTNPRI SLGLCNYKEV  480
RESSETLASD EIMLGRSEEI KAVKGFYSVK GKFVTIYEGN RDSSFRGTDY TCRLPTQTLN  540
TNIERESAVQ ADALSDQRLF SCVTCGILCF DCIAVLQPTE QAARYLMSAD CSFFNDWTVG  600
SGLTHDGFTA AHGDAITSEQ NPCTRRINRS APNALYDVPV QSVEYKFQMV DQTNQVVEDT  660
KEGGDTSALG LLASAYGNSS DSEDHVEPNA TVFGDETSSA NTSPGRKFQY NGSGFSPGNA  720
NRSHTSSLSR LDSEEEAPIH VTDSCSEPGS RRVDIKYRSP QTVDRAVEFE TDNLASGRSN  780
SLEDKFRDPI TVSHANPSCS PATHGTEKMR CSKAIAPMEN ADIPYAPRSD EDSSRMHVFC  840
LEHAVEAEQQ LRQIGGVHVF LLCHPEYPKI EAEAKLVAEE LEIDYQWNDI LFGDATKDDE  900
ERIHSALDSE DALHGNGDWA VKLGINLFYS ANLSRSTLYS KQMPYNCVIY SAFGRKSPAS  960
SPTKLNRYGR RSSKQKKVVA GKWCGKVWMS NQVHPFLAQR DPDEQEQERC FHAWATSDEN  1020
LERKRENVQK AETTKVAKVF NRKRKMRAEI APSKKVTCIE PQGAVSDDSL DGSSLRQQQR  1080
FFRGKQPRLI EKEEAISYDS LEDDSLLLCR NLSRRKQAKF LEREAAESED EEEDFNAQQH  1140
WRNLRGKQGK YFEEDDVVSG DSLDESSLKQ YRRIRRSRQA KFMEVEDAVS DDEQEEISHQ  1200
LQRRIPRGRQ IKSFERNDAI SDYSRADNAL KQYRRISKGK HPKFFERDYA MSDDASDDDS  1260
QRHLRRIPRG KHMKRMERDY AFSDDSLEDN PQQQHRRRSK VAKYTDREVV VSFGPLKGNS  1320
HQQHRKVPRS KRTKYIERED AVLSDSPGDS SLQQLRRIAR SKHTKILKRE DAVSDDSLDD  1380
TSPKQLRKTP RSRQGKFIER ENAVSYDSLE ENYHQPNRNL RSRKKKAQTP RQIQQETPQN  1440
VKQGKRRTTK QVVSQQMKLE TPRNRNTKIE QSARQCNSYG EDEIEGGPST RLRKRVRKPL  1500
KESEAKPKEK KQASKKKVKN ASNVKTLAGH NTAKVKDEEA EYQCDMEGCT MSFGLKQELV  1560
LHKRNICPVK GCGKKFFSHK YLVQHRRVHI DDRPLKCPWK GCKMTFKWAW ARTEHIRVHT  1620
GARPYVCAEE GCGQTFRFVS DFSRHKRKTG HSTKKARG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1023	1045	RKRENVQKAETTKVAKVFNRKRK
2	1491	1497	RLRKRVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein