PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022769979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 251aa MW: 29044.2 Da PI: 9.7624 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.1 | 1.4e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++ rqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eyss XP_022769979.1 10 RIENNTSRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSNRGKLFEYSS 59 8***********************************************96 PP | |||||||
2 | K-box | 91.7 | 1.3e-30 | 85 | 174 | 11 | 100 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ +++++ e +kL + +e Lqr++Rh+lGe+L++Lsl++L+ Leqq+++slk+iR++Kn+l+le+i+elqkkek lq++n++L k+l+e XP_022769979.1 85 SESQANSTLECNKLMSTVEALQRNLRHFLGEELDPLSLRDLKLLEQQIDNSLKRIRTRKNKLMLESISELQKKEKTLQDQNNMLAKNLKE 174 566789999****************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRGRVQLRR IENNTSRQVT FSKRRTGLLK KAHEISVLCD AEVALIVFSN RGKLFEYSSE 60 SRMERILERY ERQSYSERLL VPTGSESQAN STLECNKLMS TVEALQRNLR HFLGEELDPL 120 SLRDLKLLEQ QIDNSLKRIR TRKNKLMLES ISELQKKEKT LQDQNNMLAK NLKEYEKRLP 180 EHAQCEHQNY AQNSSWSIVQ PPPPPATIQF PSLTIGGCYQ AIEGITKEAE TQPQPSISTV 240 IPPWMLRHLN R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 2e-75 | MIKC_MADS family protein |