PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769977.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 417aa    MW: 46799.4 Da    PI: 8.5514
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769977.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS350.92.1e-107374161374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA++ ssg+l++a+++L ++s las +gd+mqRl a f+ ALa rl++ +++l kal+ ++ +    +e  +a  lf  ++P+l fs+
  XP_022769977.1  37 LIQLLLTCAKHTSSGNLHRADECLRQISLLASVSGDSMQRLSARFASALAIRLVKRWPGLHKALSYTQLP---KQELDQAKPLFGRAFPYLGFSY 128
                     689******************************************************************9...5555567889************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                      +  +++++a+ ge+ +H +D++ + G  W++Ll+++++ p+gpp+l++T +++    +k+ le++g  L k Ae+lg+pf+fn+l   +l +l+
  XP_022769977.1 129 AIIARTLVKAMMGERVIHLVDLGSGDGNLWIPLLRSFSCSPGGPPHLKVTCLNA----NKTVLEKLGPMLVKEAEALGMPFQFNPL-NVSLRELT 218
                     ******************************************************....9**************************5.889***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll..................desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
                     l++L++++gEala  ++l+lh+ll                  ++s +       +L++++s+sPk++ +ve+eadhn +++++rf+e l+yysa+
  XP_022769977.1 219 LDMLKIRSGEALACISILSLHTLLaeddrvdahfghnkingiKDSKQ----MFMFLSMIRSVSPKLLLLVEKEADHNLNRLVDRFVEGLHYYSAV 309
                     **********************************9987555444444....455***************************************** PP

            GRAS 268 fdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlg 361
                     fds++a+l++ s  er+++E++ +g+ei+n+vaceg er+erhe++++W  r+++aGFkpv++ ++ +++ak +++ ++ dgy++ +e++sl+++
  XP_022769977.1 310 FDSIDATLGAMSsGERHVLEEM-FGKEIENIVACEGLERQERHERYGRWMVRFGQAGFKPVRIWYDSMEDAKQMVEAYGRDGYKIVNEKASLMIC 403
                     ********99887999999999.************************************************************************ PP

            GRAS 362 WkdrpLvsvSaWr 374
                     W+drpL++vSaW+
  XP_022769977.1 404 WHDRPLYAVSAWT 416
                     ************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
MSTSFPSRKP EVTLSLTLSP GPTPLEALKP EERGIRLIQL LLTCAKHTSS GNLHRADECL  60
RQISLLASVS GDSMQRLSAR FASALAIRLV KRWPGLHKAL SYTQLPKQEL DQAKPLFGRA  120
FPYLGFSYAI IARTLVKAMM GERVIHLVDL GSGDGNLWIP LLRSFSCSPG GPPHLKVTCL  180
NANKTVLEKL GPMLVKEAEA LGMPFQFNPL NVSLRELTLD MLKIRSGEAL ACISILSLHT  240
LLAEDDRVDA HFGHNKINGI KDSKQMFMFL SMIRSVSPKL LLLVEKEADH NLNRLVDRFV  300
EGLHYYSAVF DSIDATLGAM SSGERHVLEE MFGKEIENIV ACEGLERQER HERYGRWMVR  360
FGQAGFKPVR IWYDSMEDAK QMVEAYGRDG YKIVNEKASL MICWHDRPLY AVSAWTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-111GRAS family protein