PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022769882.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 739aa MW: 82798.3 Da PI: 6.9247 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 62.9 | 5e-20 | 599 | 695 | 2 | 95 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae+h +++ + ++t+ +ed ++r W++++++ ++ks++y+l+ ++ +Fv+ ngL+egDf+v++ ++ +++ XP_022769882.1 599 QKVLKQSDVGNLGRIVLPKKEAETHlpELEARDGITIAMEDiGTSRIWNMRYRFwpNNKSRMYLLE-NTGDFVRTNGLQEGDFIVIY--SDvKCA 690 79*************************99999*********7778*******99777777777777.********************..555888 PP ..EEE CS B3 91 elvvk 95 +++++ XP_022769882.1 691 KYLIR 695 77765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 739 aa Download sequence |
MVFDMKGVQQ QLRGEDLHAG YRNEANPSGV DAVEAERVTT MGTEEREIWL DRQQHDHLLD 60 VNAASIFYDD FPPLPDFPCM SSSSSTPAPV KAIACSSSAS TASSSSSAAS WAVLKSDAAE 120 EAKRKNNGHG HHHHHHNHNH QHHNQHDLVD GTTATLSSTA SMEIPQPPDH NVMDGVDCMD 180 VMENFGYMDL PDDKDFFDPS IFHHDNTGLE DFQQEQKPQE QSQQLDQEVS MICSKNEDPT 240 QEQKASDNLA MVFLEWLKTN KETVSAEDLR RVKIRKATIE CAARRLGGGK EAMKQLLKLI 300 LEWVQTNHLQ KRRIKEPAAS NNIDLPYQCQ DPFQNPNPNP KPSSNPNLNC NSVPPSEPNS 360 CFPLPPWIPQ PAYVSDPTAA EVVGFAPVVG YMADPFANGA SNVTSHPYQP PTDYQMLDSA 420 QTRAASQFAL ASQYNLFPDN NLRPAPPQPS AFPGYGNQYP YQYVYGHDND QRLVRLGSSA 480 TKEARKKRMA RHRRFSSHHR NHNHHNNQQS QLQNQSVDQY ARLVNDSCVP AAQANLRNWV 540 YWPSVADGVA SSPPVLPGEV ALVHPVDRPA MQGQTYQRPV ASDRRQGWKP EKNLRFLLQK 600 VLKQSDVGNL GRIVLPKKEA ETHLPELEAR DGITIAMEDI GTSRIWNMRY RFWPNNKSRM 660 YLLENTGDFV RTNGLQEGDF IVIYSDVKCA KYLIRGVKVR QPGPKLETKR SGKSQKNQHA 720 NSPVAVINGS SSPITQTVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G24650.1 | 1e-154 | B3 family protein |