PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022769861.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ERF | ||||||||
Protein Properties | Length: 145aa MW: 16326 Da PI: 5.4058 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.2 | 1.1e-19 | 17 | 67 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++++eIrd + + +r +lg+f taeeAa+a+++a+ +++g XP_022769861.1 17 RYRGVRRRP-WGKYASEIRDS---KrQGARLWLGTFETAEEAARAYDRAAFSMRG 67 6********.**********3...2224*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MKEDNKKKVS EGEPSVRYRG VRRRPWGKYA SEIRDSKRQG ARLWLGTFET AEEAARAYDR 60 AAFSMRGPLA ILNFPGERLI SPTTVNSLPP PSSSSSSASS SSSSSFSENA ESRTDHEKEV 120 LELEYLDDKL LEELLDFENY ETKKG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 2e-23 | ERF family protein |