PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769814.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 480aa MW: 52922.6 Da PI: 8.7902

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022769814.1 6 FVCEICNKGFQRDQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	15.7	4.3e-05	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ XP_022769814.1 82 WKCDKCSKKYAVQSDWKAHQKTC 104 58*******************98 PP
3	zf-C2H2	10.8	0.0015	112	130	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsrk+++++H + XP_022769814.1 112 DCGTIFSRKDSFVTHRAFC 130 8**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLRQRITS EVKKRVYICP EPTCVHHNSA 60 RALGDLTGIK KHFSRKHGEK KWKCDKCSKK YAVQSDWKAH QKTCGTREYK CDCGTIFSRK 120 DSFVTHRAFC DALAEENNKV NQGLMNNINM GSNLLNQMPE LMSSMPMSNA NTSLGTSDFN 180 NIDPKNSLKS LPQELVPMPF KPMNMGGGMF SSSSGTLFGS QGSISSASSS LQLSSNNPSG 240 FNYLQNSNNA CQIDGSPHVS ATALLQKAAQ MGATASNSIN SPMMQKSFPS SMAGPDQSIR 300 PTYFGGMQQQ NTSYEHFPSQ TDHSSMVGIN EGGFSNPLMQ KSPNEMVQLF NTVAGSSGMN 360 DMGIFTNMFI NGADRNQGLI KNMEHEDCGS SSLLQGRTQA IERNPPGPAI FGASNGENNM 420 TTLDFMGIGV SRPVNLHEQQ HQQQRLELEA ISQQRLPMIN PFQQQLSHGN SAIAKSIWDV

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLRQRITS EVKKRVYICP EPTCVHHNSA  60
RALGDLTGIK KHFSRKHGEK KWKCDKCSKK YAVQSDWKAH QKTCGTREYK CDCGTIFSRK  120
DSFVTHRAFC DALAEENNKV NQGLMNNINM GSNLLNQMPE LMSSMPMSNA NTSLGTSDFN  180
NIDPKNSLKS LPQELVPMPF KPMNMGGGMF SSSSGTLFGS QGSISSASSS LQLSSNNPSG  240
FNYLQNSNNA CQIDGSPHVS ATALLQKAAQ MGATASNSIN SPMMQKSFPS SMAGPDQSIR  300
PTYFGGMQQQ NTSYEHFPSQ TDHSSMVGIN EGGFSNPLMQ KSPNEMVQLF NTVAGSSGMN  360
DMGIFTNMFI NGADRNQGLI KNMEHEDCGS SSLLQGRTQA IERNPPGPAI FGASNGENNM  420
TTLDFMGIGV SRPVNLHEQQ HQQQRLELEA ISQQRLPMIN PFQQQLSHGN SAIAKSIWDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-81	C2H2 family protein